Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4054 |
Symbol | |
ID | 4673348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4319848 |
End bp | 4320597 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639841095 |
Product | AzlC family protein |
Protein accession | YP_988234 |
Protein GI | 121596338 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.557844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGC CTTTCCTGCG CGCCCAGCTG CGCGACCCGG CCTTCCGCCA GGGCGCCGGT GACATGGCCG GCACCTGCCT GGGCATCGGC GCCTGGGGCC TGGTGACGGG CGTGGCCATG GCCAAGAGCG GCATGTCGCT GCCGATGGCG CTGTTCATGT CGCTGGCGGT GTATGCCGGC AGCGCACAGC TGGCCGTGCT GCCGCTGATG GTGGCGGGCG CACCGCTGTG GGTGGTGTGG CTCACGGCCA CCTGCGTGAA CCTGCGCTTC GTGATCTTCA GCAGCATGTG GCGCAGCTAT TTCGCCCACC TGCCGCGCCG CCACCGGCTG GCGCTGGGCT ACTTCAGCGG CGATGTGATC TTCGTGAGCT TCATGAAGCG CTTTCCCAAG CCCGTGCCTG CGCCCGAGCA GGTGCCCTAT TTCTGGGGCG CGGCCTCGGC CAACTGGCTG GCCTGGCAGG TGCCTTCCAT TGCGGGCATC GTGCTGGCCA ACGCCATCCC GCTGTCCTGG GGGCTGGGCT TTGCGGGCGT GCTGGCGCTG CTGGGCATCC TGCTGTCCAT GCTGAACGAC CGTGCCACCT GGCTCGCCAC GGCCGTGGCC TGCACGGCGG CGGTGGCCAC CTTCGCGCTG CCGCTCAAGC TCAACATCCT GGTGGCGATC GCCGCAGCCG TCACCGCAGG GCTGGCCGCC GAAGCGGCCG AGCGTGCGCT GCGGCGTGCG CGTACCCGCG CGGTGGGAGG CGACACATGA
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Protein sequence | MSLPFLRAQL RDPAFRQGAG DMAGTCLGIG AWGLVTGVAM AKSGMSLPMA LFMSLAVYAG SAQLAVLPLM VAGAPLWVVW LTATCVNLRF VIFSSMWRSY FAHLPRRHRL ALGYFSGDVI FVSFMKRFPK PVPAPEQVPY FWGAASANWL AWQVPSIAGI VLANAIPLSW GLGFAGVLAL LGILLSMLND RATWLATAVA CTAAVATFAL PLKLNILVAI AAAVTAGLAA EAAERALRRA RTRAVGGDT
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