| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4033 |
|---|
| Symbol | |
|---|
| ID | 4672417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 4299554 |
|---|
| End bp | 4301119 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639841073 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_988213 |
|---|
| Protein GI | 121596317 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGGTT CTCTACAAAA TTGGCTTCCA GCGCCCAGCT GGAAAGCGCT GACAGCTTCT
TTTTTTATAG CATTTGGCTC CCTGCAAGCA CCGGCTGTGG TGGCACAGCC ATCGCTGCCC
ACACTGGGAG ACGGCCTGGA GATGACGACC AGCGCCGAGC GCAAGCTGGG CGACCGCATC
ATCCGCGAGC TGTACCGCGA CCCGGATTAC ATCGATGACG CGGTGCTGAC TGAGTATGTG
CAGAGCCTGT TCCTGCCACT GGTGCAGGCC GCCAAGGCGC GGGGGGAGCT GTCGCCCGAA
CTCGAGGAAC GCTTTGCCTG GGAGATCTTG CTGGGCCGCG ACCGTACGGT GAACGCATTT
GCCCTGCCGG GCGGCTACTT CGGCGTGCAC CTCGGGCTGA TCGGGGTGGT GAGCACGCGC
GACGAACTCG CGTCGGTGCT GGCGCACGAA CTCAGCCATG TCACCCAGCG CCACATTTCA
CGCCTGATCG CGCAGCAGGG GCGGCAGACG CCGCTGATGC TGGGCGCGCT GATCCTCGGC
GCGCTGGCTG CGAGCCGCAG CCCCGATGCG GCCCAGGCCC TGATGGTGGG CGGGCAGGCG
CTGGCCGTGC AGAGCCAGCT GAACTTCTCG CGCGACATGG AGCGCGAGGC CGACCGTGTG
GGCTACGGCC TGATGGCGCC CGCTGGCTTT GCGCCGCAGG GTTTCGTGGG CATGTTCGAC
AAGCTGCAGC AGGCCAACCG CATCAACGAC AACGGCAGTT GGCCCTACCT GCGCAGCCAC
CCCTTGACCA CGCAGCGCAT CGCGGACATG CACAGCCGCA TTCCGCCGGG TGCGGCGCAG
CCCGCGCGGG CTACGCTGGA GCACCTGATG ATGGCTGCGC GCGCGCGCGT GCTGATGCGC
CCCGGTGTCG ACGCTTGGCG ACAGTGGGTT GCCGAGCCGC AGGACGCCGG CTTTGCCGCA
CGGCCCGCAC CGCAGCAGGT GGCGGCCTGG TATGCGGCCA CCCTCAGCGC GGTGCAGTTG
GGCGACATGG CGGCTGCGCG CAAGGCGTTG CGTGCGCTGC AGTCCAGCGC AGGTACCGAT
GCTGCAGCGT TGCGCCAGGC GCGCCTGCTG GGTGCTGAGC TGGAGCTGGC TGCGGGCGAT
GCGCCCGCGG CGCTGACGTA CCTGCAGGGC AGCGTCGTCA CGGAAGGCAG CGGTGTGCCC
AGCGCGCCCG CGCCCGCACG GCCAGAGATG CTGCTGCGCA CCCAGGCCCT GCTGCGCACG
GGCGCGGCAG GCGAGATGGT GGGGCCCTTG CAGACCTGGG TGGCCACGCA TCCTCGGGAC
GCGACCGTCT GGCAGGCGCT GGCGCAGGTA TGGCAACAGC AGGGGCAGCC CCTGCGCGCC
GTGCGCGCCG AGGCCGAGGC ACACGCCGCA CGCTATGACT ACGCGGCCGC GGTGGATCGT
TTCAAGGCGG GGCAGGACCT TGCGCGGCGC AGCAGCGCGG CGGGGGATTA CATCGAAGCG
TCGATCATCG ACACGCGCCT GCGTGCCGTG GAGTCACTTC TTAAGGAACA GGCCGCCGAG
CGCTGA
|
|---|
| Protein sequence | MQGSLQNWLP APSWKALTAS FFIAFGSLQA PAVVAQPSLP TLGDGLEMTT SAERKLGDRI
IRELYRDPDY IDDAVLTEYV QSLFLPLVQA AKARGELSPE LEERFAWEIL LGRDRTVNAF
ALPGGYFGVH LGLIGVVSTR DELASVLAHE LSHVTQRHIS RLIAQQGRQT PLMLGALILG
ALAASRSPDA AQALMVGGQA LAVQSQLNFS RDMEREADRV GYGLMAPAGF APQGFVGMFD
KLQQANRIND NGSWPYLRSH PLTTQRIADM HSRIPPGAAQ PARATLEHLM MAARARVLMR
PGVDAWRQWV AEPQDAGFAA RPAPQQVAAW YAATLSAVQL GDMAAARKAL RALQSSAGTD
AAALRQARLL GAELELAAGD APAALTYLQG SVVTEGSGVP SAPAPARPEM LLRTQALLRT
GAAGEMVGPL QTWVATHPRD ATVWQALAQV WQQQGQPLRA VRAEAEAHAA RYDYAAAVDR
FKAGQDLARR SSAAGDYIEA SIIDTRLRAV ESLLKEQAAE R
|
|---|
| |