Gene Ajs_4014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4014 
Symbol 
ID4671856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4274466 
End bp4275116 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID639841054 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_988194 
Protein GI121596298 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC CTCTCCTCAT CGGCAGTCTC GCGGTGGTCA TGCTGGCCAC GGGCTGTGCC 
AACATGACCG ACACCCAGCG CCGCACCGCC ACCGGCGCCG GCGTGGGTGC GCTGGGCGGC
GCAGCCATCG GCGCCATGAC GGGCGGTCAT GCGGCGCAGG GCGCCGTGAT CGGCGCGGGC
GTGGGCGCCC TGGGCACCTA CATCTGGTCC CAGCACATGG AGCGCCAAAA GCAAGACATG
CAGGCCGCCA CCCAGGGCAC CGGTGTGACG GTGACGCAGA CGCCGGACAA CCAACTCAAG
CTGGACATCC CGAGCGATAT CTCGTTCGCC ACCAACCGTT CGGACATCCA GCCCAACTTC
CGCCCCATTC TGGACCGCTT TGCCGAGGGC CTGCGCAACA ATCCGAACAC CGAGGTGCGC
ATCGTCGGCC ACACCGACTC CACCGGCAGC GATGCGATCA ACAACCCGTT GTCGCTGGAC
CGCGCCGAGA GCACGCGCAA CTACCTCACG GCGCGTGGCG TGAACGGCAA CCGCATCCAC
GTGGAAGGCC GTGGCTCGCG TGAACCTGTG GCCTCCAACG ACACCTCCGA CGGGCGCGCC
CGCAACCGCC GCGTGGAGAT TTATGTGGGT GAGCGCCAGG GCCGCGGCTG A
 
Protein sequence
MRKPLLIGSL AVVMLATGCA NMTDTQRRTA TGAGVGALGG AAIGAMTGGH AAQGAVIGAG 
VGALGTYIWS QHMERQKQDM QAATQGTGVT VTQTPDNQLK LDIPSDISFA TNRSDIQPNF
RPILDRFAEG LRNNPNTEVR IVGHTDSTGS DAINNPLSLD RAESTRNYLT ARGVNGNRIH
VEGRGSREPV ASNDTSDGRA RNRRVEIYVG ERQGRG