Gene Ajs_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4013 
Symbol 
ID4671831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4272988 
End bp4274196 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content72% 
IMG OID639841053 
ProductMltA domain-containing protein 
Protein accessionYP_988193 
Protein GI121596297 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCACC AGACAATGCC CACGAGGAGC ACCAGTGCAA GCAATGCTTC AAGCAAAATC 
AGCCCCATGA ATCTTCGTCT CCTGCGCCTG GTGGTATCGG CGCTGATTGT AGGAACGCTG
GCCGCGTGCT CCACCCGTCC TCCGGCGCCC GTGGCGCCCA GCGTGCCGTC CGTGCAGCCG
CCCGCCGCGC CCACTGTACC GGTGCCTGTG CCGGGCACGC TCACGCAGTC CAAGAGCCGC
TGGGTGCCGG TGGGCTGGGG CGAGTTGCCG GGCTTTGAGG GCGATGCGCT GCACGAGGCC
TGGAACGCCT GGCTGCGCAG CTGCGAGCGC CCCGCGCCGG CGTTCGCGCC GCTGTGCGGC
GATGTGCGCC GCCTGAGCAT CGCGTCGCCC GAGGAGCAGC GCGGCTGGAT GATGCAGCGC
CTGCAGCCCT ACCGCGTCGA GTCGCTGGAC GGAGCGGCCG ACGGCCTGCT CACGGGCTAC
TTTGAGCCCT ATCTGGACGC CGCGCGCCAA CCGGGCAACG GCTTCAGCGT GCCTTTGTAT
GCACCCCCGG CCGATCTGGC GGCGCGCAAG CCCTGGTACA CGCGCCAGCA GATCGACACC
CTGCCGCAGG CCCAGGCGGC GCTGGCCGGC CGCGCGATCG CCTGGGTGCG CGACCCGGTG
GAAGCCATGG TGCTGCACAT CCAGGGCTCG GGCCGGCTGC GCGTGCAGGA GGCGGACGGC
AGCGTGCGCC TGGTGCGCCT GGCCTTCGCG GGCACCAACG ACCAGCCGTA CAAGAGCGTG
GGCAAGTGGC TGCTGGACCA GGGCCTGGTG CGCGACGCCA CCTGGCCCGG CATCACCGCC
TGGGTGCGGG CCAATCCGCA GCGCGTGAAC GAGATGCTGT GGTCCAACCC GCGCTACGTG
TTCTTTCGCG AGGAGCCGCT GGACGCGCTG GACGCCGCCT TCGGGCCTAA GGGCGCGCAG
GGCGTGCCGC TCACGCCGGG GCGCTCGATC GCCGTGGACC GCCAGAGCAT CCCCTACGGC
ACGCCGGTGT GGCTGGCCTC CAGCGGCCCC ACGGCGCAGT TGTCGCGCCT GGTGCTGGCG
CAGGACACGG GCAGCGCCAT CCTGGGCGCG GTGCGCGCGG ATTACTTCAC CGGCTGGGGC
CCCGAGGCGG GCGAGATTGC CGGGCGCCTG AAGCAGGGCC TGCGCCTGTG GGCGTTGTGG
CCGCGGTAG
 
Protein sequence
MVHQTMPTRS TSASNASSKI SPMNLRLLRL VVSALIVGTL AACSTRPPAP VAPSVPSVQP 
PAAPTVPVPV PGTLTQSKSR WVPVGWGELP GFEGDALHEA WNAWLRSCER PAPAFAPLCG
DVRRLSIASP EEQRGWMMQR LQPYRVESLD GAADGLLTGY FEPYLDAARQ PGNGFSVPLY
APPADLAARK PWYTRQQIDT LPQAQAALAG RAIAWVRDPV EAMVLHIQGS GRLRVQEADG
SVRLVRLAFA GTNDQPYKSV GKWLLDQGLV RDATWPGITA WVRANPQRVN EMLWSNPRYV
FFREEPLDAL DAAFGPKGAQ GVPLTPGRSI AVDRQSIPYG TPVWLASSGP TAQLSRLVLA
QDTGSAILGA VRADYFTGWG PEAGEIAGRL KQGLRLWALW PR