Gene Ajs_4009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4009 
Symbol 
ID4671705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4268261 
End bp4268767 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content68% 
IMG OID639841049 
ProductAsnC family transcriptional regulator 
Protein accessionYP_988189 
Protein GI121596293 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT TGGACAAATA CGACATCGCC ATCCTGCGCG AGCTGCAGGC CGAGGCGCGC 
CTGACCAACG CCGAGCTGGC GCAACGCGTA GGCCTGTCCG CTGCACCGTG CTGGCGGCGC
GTACGCGCCC TGGAGGAAGC GGGCTACATC CGCGGCTATC ACGCGGAAAT CGACCGCCAC
AAGATCGGCC TGGGCGTACT GGCGTTCGTG CGCCTGGACG CCGAGCGCAA CACCGGCGAC
CTGACGCTGG CCATGGAGCA GGCCATCGCC CAGATCCCCG AGGTGGTCTC ATGCCACTAC
ATCAGCGGCA CCGGCACCTT CGAGCTGCAG GTGGTGGCAC GCGACCTGGA CAGCTTCTCG
CAGTTCGCAC GCACCGTGCT GCTGAACCTG CCCAACGTGA AGGACATGCA CACCAGCTTC
TCGCTGGGCG AGGTCAAGGC AGGCGGCGCG CTGCCGTTGG CGCACCTGGG CCCGGTGCGG
CCCGTGGTGC GTGGCGCCGC AGCGTAG
 
Protein sequence
METLDKYDIA ILRELQAEAR LTNAELAQRV GLSAAPCWRR VRALEEAGYI RGYHAEIDRH 
KIGLGVLAFV RLDAERNTGD LTLAMEQAIA QIPEVVSCHY ISGTGTFELQ VVARDLDSFS
QFARTVLLNL PNVKDMHTSF SLGEVKAGGA LPLAHLGPVR PVVRGAAA