Gene Ajs_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4006 
Symbol 
ID4671636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4262509 
End bp4262838 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID639841046 
Productprotein translocase subunit yajC 
Protein accessionYP_988186 
Protein GI121596290 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTCTT CTGCTTTTGC ACAGACCGCC CCCGCCGCAG CCGCCGAGGC CGGCCTGATG 
GGATCGCTCA CCAGCATGCT GCCGCTGGTG CTGATGTTCG TGGTGCTGTA CTTCATCATG
ATCCGTCCCC AGATGAAGCG CCAGAAAGAG CACCGCGCCA TGATCGACGC GCTGGCCAAG
GGCGACGAAG TGGCCACGGC CGGCGGCTTG CTGGGCAAGG TGGCGGGCCT GAGCGAAGGC
TACCTGCAAC TGGAGATTGC GCCTGGCGTG CAGGTGCAAG TGCAGCGCAG CGCCGTGGCC
CAGGTGCTGC CCAAGGGCAC GGTCAAGTAA
 
Protein sequence
MISSAFAQTA PAAAAEAGLM GSLTSMLPLV LMFVVLYFIM IRPQMKRQKE HRAMIDALAK 
GDEVATAGGL LGKVAGLSEG YLQLEIAPGV QVQVQRSAVA QVLPKGTVK