Gene Ajs_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3985 
Symbol 
ID4670968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4240104 
End bp4240643 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID639841027 
Producthypothetical protein 
Protein accessionYP_988167 
Protein GI121596271 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000360213 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.454533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAATC TTCTATATGT TGATAACTCG AACGTTTGGA TTGAAGGCAT GCACGTTGCA 
GCCGCACGAA ATGGTCTAGC TCCGGATGTA TGGTCCGCAG TTCAACAACG AATCTGCGAC
TACAACTGGA AAATCGACTT TGGGAAGCTG TTCCAGTTTG CTGGCGGCGA CCGAAATTTA
GTAAAAAAAG CCGGATTGTT CGGTTCTCGC CCACCGAAGA ATGATTCACT TTGGACCGCT
GCAGAGAAAA ATGGCTTTGA AGTCATCGTC TATGACCGAA ACATAGCTGG CCATGAAAAG
AAAATTGATA CTGACATCGT CGCAACGATG ATTGAAGATT CATACGAAAT CCTTACCATT
GGGCAAGACG AAATTACTCT GGTCTCTGGC GATTCTGACT ATGTGCCCGC CATTGAGAAA
CTGAAAAAAC GTGGCATTCC CGTCCATGTA GTTTTTTGGG GGCACGCAGC CAGGGAGCTC
AAAGAGGTTG CAACAAAATT CGTGAACTTG GACCCATACC TTGATCATTT AGCAAAGTAA
 
Protein sequence
MANLLYVDNS NVWIEGMHVA AARNGLAPDV WSAVQQRICD YNWKIDFGKL FQFAGGDRNL 
VKKAGLFGSR PPKNDSLWTA AEKNGFEVIV YDRNIAGHEK KIDTDIVATM IEDSYEILTI
GQDEITLVSG DSDYVPAIEK LKKRGIPVHV VFWGHAAREL KEVATKFVNL DPYLDHLAK