| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3972 |
|---|
| Symbol | |
|---|
| ID | 4671180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 4227590 |
|---|
| End bp | 4228741 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639841014 |
|---|
| Product | thiolase |
|---|
| Protein accession | YP_988154 |
|---|
| Protein GI | 121596258 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.330404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAC CCTCCCCCGC CTACCTGCGC GGCGCGGGCA GCACACCCTT TGGCCGCCAC
GAAGGGCGCG GCGCGCTCGA CCTGATGGCC GGCGCCGCGC ACCAGGCGCT GGCCAGCGCC
GGCCTGGCGC GCGCCGACAT CGACGGCGTG CTGTGCGGCT ATGCCACCAC GCTGCCGCAC
CTGATGCTGT CCACGCTGTT CTGCGAGCGC TTCGCACTGG CGCCGCACTA CGCGCACAGC
ATGCAGCTGG GCGGGGCCAC GGGCGCGGCC ATGCTGATGG CCGCGCGCGA GCTGGTGCGC
TCGGGCCGCT GCCGCAACGT GCTGGTGGTG GCGGGGGAGA ACCGCCTCAC GGGCCAGTCG
CGCGACAGCT CCATCCAGAC CCTCGCCCAG GTGGGCGACG CCGACTACGA GGTGCCCAAC
GGCGCCAGCG TGCCCGCGTA CTACGCGCTG ATGGCCTCGG AATACATGCA CCGCACGGGC
GTCACCAGCG CCGACCTGGC CGAGTTCGCC GTGCTCATGC GCGCCAACGC CGCGCGCCAC
CCCGAGGCGC ACCTGCGCAC GCCCATCACC CATGCCGAGG TGCTGGCCGC CAAGCCCATC
GCCGCGCCGC TGTCGCTGCT GGACTGCTGC CCCATTTCCG ACGGCGCCAT GGCGTTCGTC
GTCTCGGCCG AGCCCGGCCC GCACGCCCCT GTGCGCCTGG CGGGCGCGGG CCAGGCGCAC
CGCCACCAGC ACCTCACCGC CATGGCCGAC GTGATGCGGT GCGGCGCATC CGATGCCGCC
GCCCAGGCCT TTGCCGAGGC CGGCCTGACC CCTGCGGACA TCGACTACCT GGGCATCTAC
GACTCTTTCA CGATCACGCT GGTGATGCTG CTCGAAGAGA TCGGCTTCGC GCCGCGCGCC
GGCGCCGCCG CACGGGCCCG CGCGGGCGAC TTCGCGCCCA CGGGCGCGCT GCCGCTGAAC
ACGCACGGCG GCCTGCTGTC GTTCGGCCAC TGCGGCGTGG CCGGCGGCAT GGCCCACACC
GTGGAGGCCT GGCGGCAGAT GACGGGCCAG GCGGGCGAGC GGCAGATCCG TGCGCCGCAA
CGCGCCTTCA TCCATGCCGA CGGGGGCGTG ATGTCGTCCC ACGTGAGCCT CATTCTTTCA
ACGGAGGGCT GA
|
|---|
| Protein sequence | MTPPSPAYLR GAGSTPFGRH EGRGALDLMA GAAHQALASA GLARADIDGV LCGYATTLPH
LMLSTLFCER FALAPHYAHS MQLGGATGAA MLMAARELVR SGRCRNVLVV AGENRLTGQS
RDSSIQTLAQ VGDADYEVPN GASVPAYYAL MASEYMHRTG VTSADLAEFA VLMRANAARH
PEAHLRTPIT HAEVLAAKPI AAPLSLLDCC PISDGAMAFV VSAEPGPHAP VRLAGAGQAH
RHQHLTAMAD VMRCGASDAA AQAFAEAGLT PADIDYLGIY DSFTITLVML LEEIGFAPRA
GAAARARAGD FAPTGALPLN THGGLLSFGH CGVAGGMAHT VEAWRQMTGQ AGERQIRAPQ
RAFIHADGGV MSSHVSLILS TEG
|
|---|
| |