Gene Ajs_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3964 
Symbol 
ID4671764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4220980 
End bp4221453 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content69% 
IMG OID639841006 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_988146 
Protein GI121596250 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.120161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.2774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA CCCAAGACAC CGCCGTCACG CTCAGCTACC GCGTCACCGA TCCCGCCACG 
GGCAAGCCGC TCGATGCCGG CAATGTGGCC TACCTGCACG GCGGCTATGA GAACATCTTC
CCCAAGGTCG AGGCCGCGCT GGAAGGCCAG GCCCCGGGCC ATGCCGTCAC GCTGGACCTG
GCGGTGGAGG ACGCATTCGG CGCGCGCGAC GAGAGCCTGG TGCGCACCAT CCCCAAGAGC
GAGTTCCCCC CCGGCGTGAA GGTGGGCGGC CAGTTGCAGG GGCCCGGCGC CGACGGCCAG
CCGCAGATGT TCCACGTGGT CAAGATCAAG GGCCCCGTGG TGCACCTGGA CGGCAACCAC
CCGCTGGCCG GCAAGGCGCT GCGTTTTGCC TGCAAGGTGA CCGAGGTGCG CGCCGCCACG
GCCGAGGAGA TCGCCCACCG CCATGTGCAT GGCGGGCACG GGCACCACCA TTGA
 
Protein sequence
MNITQDTAVT LSYRVTDPAT GKPLDAGNVA YLHGGYENIF PKVEAALEGQ APGHAVTLDL 
AVEDAFGARD ESLVRTIPKS EFPPGVKVGG QLQGPGADGQ PQMFHVVKIK GPVVHLDGNH
PLAGKALRFA CKVTEVRAAT AEEIAHRHVH GGHGHHH