Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3960 |
Symbol | |
ID | 4671887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4217685 |
End bp | 4218686 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639841002 |
Product | glyceraldehyde-3-phosphate dehydrogenase |
Protein accession | YP_988142 |
Protein GI | 121596246 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.94845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA AGATTGGCAT CAACGGCTTC GGCCGCATCG GCCGCAACGT ACTGCGCTCG GCCGTGCAGA ACTTCTCCGA CATCGAAGTC GTTGGCATCA ACGACCTGCT GGAGCCCGAT TACCTCGCGT ACATGCTGCG CTATGACAGC GTGCATGGCC GCTTCAAGGG CGAGGTCTCG GTCGAGGGCA ACACGCTGAT CGTCAACGGC AAGAAGATCC GCCTGACGCA GGAGCGCGAT CCCGCCAACC TGAAGTGGAA CGAAGTCGGC GCCGACATCG TGATCGAGTC CACCGGCCTG TTCCTGGACA AGGCCAGCGC CGAGAAGCAC ATCGCTGCCG GCGCCAAGAA GGTGCTGATG TCGGCCCCGT CCAAGGACGA CACGCCCATG TTCGTGTTCG GCGTGAACCA CGCCACCTAC GCCGGCCAGG CCATCATCTC CAACGCGTCC TGCACCACCA ACTGCCTGGC TCCCGTGGCC AAGGTGCTGC ATGACAAGTG GGGCATCAAG CGCGGCCTGA TGACCACCGT GCACGCCGCC ACCGCCACGC AAAAGACCGT GGACGGCCCG AGCAACAAGG ACTGGCGCGG CGGCCGCGGC ATTCTGGAAA ACATCATCCC CAGCTCCACC GGCGCCGCCA AGGCCGTGGG CGTGGTGATC CCGTCGCTGA ACAAGAAGCT GACCGGCATG TCCTTCCGCG TGCCCACCTC CGACGTGTCG GTGGTGGACC TGACGGTGGA GCTGGAGAAG GAAGCCAGCT ACGACGAGAT CAAGGCCGAG ATGAAGGCCC AGTCCGAGGG CGCGCTGAAG GGCGTGCTGG CCTATACCGA GGACAAGGTG GTGGCCACCG ACTTCGTGGG CGAGACCCAC ACCTCGGTGT TCGACGCCGA CGCCGGCATC GCCCTGGACA AGACCTTCGT GAAGGTCGTG GCCTGGTACG ACAACGAGTG GGGCTACTCC AACAAGTGCC TGGAGATGGT GCGCGTGATG GCCGGCAAGT AA
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Protein sequence | MTIKIGINGF GRIGRNVLRS AVQNFSDIEV VGINDLLEPD YLAYMLRYDS VHGRFKGEVS VEGNTLIVNG KKIRLTQERD PANLKWNEVG ADIVIESTGL FLDKASAEKH IAAGAKKVLM SAPSKDDTPM FVFGVNHATY AGQAIISNAS CTTNCLAPVA KVLHDKWGIK RGLMTTVHAA TATQKTVDGP SNKDWRGGRG ILENIIPSST GAAKAVGVVI PSLNKKLTGM SFRVPTSDVS VVDLTVELEK EASYDEIKAE MKAQSEGALK GVLAYTEDKV VATDFVGETH TSVFDADAGI ALDKTFVKVV AWYDNEWGYS NKCLEMVRVM AGK
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