| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3959 |
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| Symbol | |
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| ID | 4671881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4215595 |
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| End bp | 4217631 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639841001 |
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| Product | transketolase |
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| Protein accession | YP_988141 |
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| Protein GI | 121596245 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACT CTCAACAAAT GGCGAATGCG ATCCGCGCAC TCGCAATGGA TGCCGTTCAA
CAAGCCAACT CCGGCCACCC CGGCGCCCCC ATGGGCATGG CCGACATGGC CGTGGCGTTG
TGGGGCCGGC ACCTGAAGCA CAACCCCACC AACCCCCAGT GGATGGACCG CGACCGTTTC
GTGCTGTCCA ACGGCCACGC GTCGATGCTG CTGTACTCGC TGCTGCACCT CACGGGCTAC
GACCTGCCCC TGCAGGAGCT GAAGAACTTC CGCCAGCTGC ACAGCAAGAC CCCCGGCCAC
CCCGAGCACG GCATCACCCC CGGCGTGGAG ACCACCACCG GCCCGCTGGG CCAGGGCGTG
ACCAACGCCG TGGGCTTTGC GCTGGCCGAG AAGCTGCTGG CCGCCGAGTT CAACCGCGAA
GGCCACGCCG TGGTGGACCA CCACACCTAC GTGTTCCTGG GCGACGGCTG CCTGATGGAA
GGCATCAGCC ATGAGGCCGT GGCTCTCGCC GGCGCGTGGA AGCTCAACAA GCTCATCGCG
CTGTACGACG ACAACGGCAT CAGCATCGAC GGCCAGGTGG CGCCCTGGTT CATCGACAAC
ACCCCGCAGC GCTTCATGGC CTGCGGCTGG AACGTGATCG ACGCCGTGGA CGGGCATGAC
GTGGAAGCTG TGGCCGCCGC CATCGGCCAA GCCAAGGCCA GCGCCGACAA GCCCACGCTG
ATCGTCTGCA AGACCGTCAT CGGCAAGGGC AGCCCCAACC GCGCCAACAC GGCCAAGGCC
CATGGCGAGC CCCTGGGCGC CGAGGAAATC AACCTCACGC GCGCTGCCCT GGGCTGGACG
CACGAGCCCT TCGCGATCCC CGAGTCGGTG TACGCCGACT GGGATGCCAA GGCGGCCGGC
CAGGCCGCCG AAGCCGAGTG GACGCTGCGC TTTGCCGCCT ACGAGGCCGC CTACCCCGAG
CTGGCATTCG AGCTGTCCCG CCGCATGGCT GGCGACCTGC CCAAGCACTT CGCCCAGGTG
GCGGTGGACA CCGTGGTGGC CGCGCACACC AAGGCCGAGA CCGTGGCCAG CCGCAAGGCC
AGCCAGATCG CGCTGGAAGC CTTCACCGCC GCACTGCCCG AACTGCTGGG CGGCAGCGCC
GACCTGACCG GCTCCAACCT CACCAACACC AAGAGCACGC CCGCGCTGCG CATCGAGCCC
AACGGCGCCG TGGCCAAGAC CGAGGCCGGC CAGGTGGGCC GCCACATCAA CTACGGCGTG
CGCGAGTTCG GCATGGCGGC CATCATGAAC GGCCTGGCGC TGCACGGCGG TTTCATCCCC
TACGGCGGCA CCTTCCTCAC ATTCAGCGAC TACAGCCGCA ACGCCATCCG CATGGCCGCG
CTGATGAAGC AGCGCGTGAT CCACGTGTTC ACGCACGACT CCATCGGCCT GGGCGAGGAC
GGCCCCACGC ACCAGTCGAT CGAGCACGCC GCCAGCCTGC GCCTGATCCC CGGCCTGGAC
GTGTGGCGCC CCGCCGACAC GGCCGAGACC GCCGTGGCCT GGAGCGTGGC CCTGTCCAAC
CGCGACAAGC CCACCGCGCT GCTGCTGTCC CGCCAGAACC TGCCCTACGC GCCCAAGAGC
GACCTGGGCG ACATCTCGCG CGGCGCCTAC ATCCTCTCCG AGCCCGCCGC CGTGGGTCTG
AAGAAGAAGG CCCAGGCCGT GATCATCGCC ACCGGCTCCG AGGTGCAGCT GGCCCTGGCC
GCGCAGCAAC TGCTGGCCGC CAAGAAGATC GCCGTGCGCG TGGTCTCCAT GCCCAGTACC
ACCACCTTCG ACCGCGAGGA CACCAAGTAC AAGCAACTGG TGCTGCCCGC CGGCACGCCG
CGCATCGCCG TCGAGATGGG CGTGTCCGAC TTCTGGTGGA AGTACGGCTG CGCCGCGGTG
GTCGGCATCG ACACCTATGG CGAGTCGGCC CCGGCCGGCG TGCTGTTCAA GCACTTCGGC
TTCACGGCCG AGAACGTCGC TGACACGGTG CTGGCCGCGC TGCAGCGCGC GCGCTGA
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| Protein sequence | MANSQQMANA IRALAMDAVQ QANSGHPGAP MGMADMAVAL WGRHLKHNPT NPQWMDRDRF
VLSNGHASML LYSLLHLTGY DLPLQELKNF RQLHSKTPGH PEHGITPGVE TTTGPLGQGV
TNAVGFALAE KLLAAEFNRE GHAVVDHHTY VFLGDGCLME GISHEAVALA GAWKLNKLIA
LYDDNGISID GQVAPWFIDN TPQRFMACGW NVIDAVDGHD VEAVAAAIGQ AKASADKPTL
IVCKTVIGKG SPNRANTAKA HGEPLGAEEI NLTRAALGWT HEPFAIPESV YADWDAKAAG
QAAEAEWTLR FAAYEAAYPE LAFELSRRMA GDLPKHFAQV AVDTVVAAHT KAETVASRKA
SQIALEAFTA ALPELLGGSA DLTGSNLTNT KSTPALRIEP NGAVAKTEAG QVGRHINYGV
REFGMAAIMN GLALHGGFIP YGGTFLTFSD YSRNAIRMAA LMKQRVIHVF THDSIGLGED
GPTHQSIEHA ASLRLIPGLD VWRPADTAET AVAWSVALSN RDKPTALLLS RQNLPYAPKS
DLGDISRGAY ILSEPAAVGL KKKAQAVIIA TGSEVQLALA AQQLLAAKKI AVRVVSMPST
TTFDREDTKY KQLVLPAGTP RIAVEMGVSD FWWKYGCAAV VGIDTYGESA PAGVLFKHFG
FTAENVADTV LAALQRAR
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