| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3957 |
|---|
| Symbol | |
|---|
| ID | 4674254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 4212295 |
|---|
| End bp | 4214460 |
|---|
| Gene Length | 2166 bp |
|---|
| Protein Length | 721 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639840999 |
|---|
| Product | aminopeptidase P |
|---|
| Protein accession | YP_988139 |
|---|
| Protein GI | 121596243 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGGC TGCACATCGA TGGCCGGGCC GTTCTCGCAG TTGCGGAACT GCCACTGGCT
GGGCAGAAAG CGGGCCTGCG GCCCGTCGGG TGCGGGCTTG CCCACTTCGG CCTGCACGTC
GTAGGGAATG TGCGGCACCT GGAACAGGGC GATCTGGCCC TGGCGGCACA GCAGCGCGGG
TACCACCTTG TTCAGCTCCC AGTCCTTGGT GTCGGTGTTG TAGCGGTACA GCGGGCCAAT
ACGCTGGTCC TGGGCCAGTT CTACGCGCAT CGGCAGCACC TGCATCGCCT GGGCCCATAC
GCCGGCCACG AGCACGGGCT GCGGAAAGCG CACCGCCTCC AGGCCGCGCA GGGACACGGG
CTGCACCGGC GCGCCGTTGT CGAAGGGGTC CAGCCGGTTG ATCAGGCTGC CCGCGGGAAT
CACCAGTTCG CCGTACTGCA CGTCGTGCGG CAGCACGAAG CGTTCGCGGT GGGTGCGATG
CACGGCGCTG TCCTGGCGCG TCTGCTGCGC GCGTCCCGAC AGGTACAGGC GCAGGCCCAG
CCAGGCATCG CACACCACGG CCACGGCGCA CAGGGCGACC AGCACGCGGC GGTCCAGCCG
CGGCTTGTTG GGAACATCGA TATACCGCGC ATAGAACGCG TAGAAAAGCA GGGCCACGGT
CAGCACCAGG CCCAGCAGGG GGATGAGGGT GGTCAGCAGG AAGGACATGC GGCGAGTCTG
CCACGGCGCC TGGGCGCCGC CGCGCGCGCC GGCCGTTGGG CCCACAATGG CAGCATGACC
ACGCCCAGCT CCCTCTACGC GCAGCGTCGC GCCCGCCTTG CCGCCCAGTT GGGCGCGGGC
GGCATCGCCA TCGTGCCCAC CGCCCCGCTG CAGCAGCGCA ACCGCGACAG CGAGTTTCTC
TACCGCCACG ACAGCTACTT CTACTACCTC ACGGGCTTTG CCGAGCCGGG CGCGTGGCTG
GTGCTGACCG CGGAAGGCCA CAGCACTCTG TTTTGCCAGC CCAAGGACCT GGAGCGCGAG
ATCTGGGATG GCTACCGCCT GGGGCCCGAG GCGGCCCTGG CCACCCTGGG CGTGGACGCC
GCGCACTCCG TGGCCGATAT CGACGCGCGC CTGCCGCGCC TGCTGGAAAA CCGCGGCAGC
GTCTGGTTCC CCTTCGCCAC CCACCCAGGA CTGGCTGCGC GTGTGGAAGG CTGGCTGAAC
CAGGTGCGCG CACGCGTGCG GTACGGCGCG CTGTGCCCCG CGCAGCAGGG TGATCTGTGC
ACGCTGCTCG ACGAGATGCG CCTGATCAAG GACGCGCATG AGCAGGACCT GATGCGCCGC
GCCGCCGCCA TCAGCGCCCG CGCCCATGTG CGCGCCATGC AAAGAAGCGC CCGCATGCTG
CGCGCCGGCC AGGACGTGCG CGAATACCAC CTGGATGCGG AGCTGCTGCA CGCGTTCCGC
GAAGAGGGCT CGCAGTGTCC GGCGTATGGT TCCATCGTGG CCGCGGGGGC CAACGCCTGC
GTGCTGCACT ACCGCGCCGA TGCCGCGCCG GTGCGTGCGG GCGAGCTGGT GCTGATCGAC
GCGGGCTGCG AGCTGGACGG CTACGCCTCG GACATCACGC GCACCTTTCC GGCCGATGGC
CGTTTCACCG GCCCGCAGCG CGCGCTGTAC GACCTGGTGC TGGAGAGCCA AAAGGCGGCC
ATCGCCGCCA CGCGTGCAGG CAACCGCTTC AACGACTCGC ACGACGCCAC GGTGGCCGTG
CTGGCGCAGG GCTTGCTGGA CTTGGGCCTG CTGGACGCCA ACAAGGTCGG CAGCGTGCAG
GACGTGATCG CGAGCCGTGC GTACTTCCAG TTCTACATGC ACCGCACCGG CCACTGGCTG
GGCATGGATG TGCACGATTG CGGCAGCTAC GTCGAGCCCT CAGAAGTGGG CCAGGTGAGC
GAGCGGCGCG ACCCGCTGTC GGGCGAGCTG ATCCAGAACC GCCCCAGCCG CATCCTGCGC
CCGGGCATGG TGCTGACCAT CGAGCCCGGC TTGTACGTGC GCCCGGCGCC GGGCGTGCCC
GAGGCCTTCC ACCACATCGG CATCCGCATC GAGGACGACG CCATCGTCAC CGAGACTGGC
TGCGAACTGA TCACCCGCGG GGTGCCCGTG GAGGGTGACG AGATCGAGGC GCTGATGCGC
GGCTGA
|
|---|
| Protein sequence | MGGLHIDGRA VLAVAELPLA GQKAGLRPVG CGLAHFGLHV VGNVRHLEQG DLALAAQQRG
YHLVQLPVLG VGVVAVQRAN TLVLGQFYAH RQHLHRLGPY AGHEHGLRKA HRLQAAQGHG
LHRRAVVEGV QPVDQAARGN HQFAVLHVVR QHEAFAVGAM HGAVLARLLR ASRQVQAQAQ
PGIAHHGHGA QGDQHAAVQP RLVGNIDIPR IERVEKQGHG QHQAQQGDEG GQQEGHAASL
PRRLGAAARA GRWAHNGSMT TPSSLYAQRR ARLAAQLGAG GIAIVPTAPL QQRNRDSEFL
YRHDSYFYYL TGFAEPGAWL VLTAEGHSTL FCQPKDLERE IWDGYRLGPE AALATLGVDA
AHSVADIDAR LPRLLENRGS VWFPFATHPG LAARVEGWLN QVRARVRYGA LCPAQQGDLC
TLLDEMRLIK DAHEQDLMRR AAAISARAHV RAMQRSARML RAGQDVREYH LDAELLHAFR
EEGSQCPAYG SIVAAGANAC VLHYRADAAP VRAGELVLID AGCELDGYAS DITRTFPADG
RFTGPQRALY DLVLESQKAA IAATRAGNRF NDSHDATVAV LAQGLLDLGL LDANKVGSVQ
DVIASRAYFQ FYMHRTGHWL GMDVHDCGSY VEPSEVGQVS ERRDPLSGEL IQNRPSRILR
PGMVLTIEPG LYVRPAPGVP EAFHHIGIRI EDDAIVTETG CELITRGVPV EGDEIEALMR
G
|
|---|
| |