Gene Ajs_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3951 
Symbol 
ID4672036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4205672 
End bp4207096 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content66% 
IMG OID639840993 
ProductNAD(P) transhydrogenase, beta subunit 
Protein accessionYP_988133 
Protein GI121596237 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.372135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA ACCTTGTCAC GCTGCTGTAC CTGGTCGCCA GCGTCTGTTT CATCCAGGCG 
CTCAAAGGCC TGTCGCACCC CACCACGTCG ATCCGCGGCA ACCTGTTCGG CATGGCGGGC
ATGGCGATCG CCGTGCTGAC CACGGCGGCG CTCATCGTGG AGCTGGCCAG TGACAAGGGC
GTGGGCATGA CCTACGTGCT GGCCGGCCTG GTGGTGGGCG GCGGCGCGGG CGCGGTGATG
GCCCAGCGCG TGGAGATGAC CAAGATGCCC GAGCTGGTGG CCTTCATGCA CAGCATGATC
GGCCTGGCGG CGGTGTTCAT CGCCGTGGCG GCCGTGGCCG AGCCCTGGGC CTTCCAGATC
GTGGCGCATG GCCAGCCGAT CCCGCTGGGC AACCGTCTGG AGCTGTTCCT GGGCGCGGCC
ATCGGCGCCA TCACCTTCAG TGGCTCGGTG ATCGCCTTCG GCAAGCTCTC GGGCAAGTAC
AAGTTCCGCC TGTTCCAGGG CGCGCCGGTG GTCTTCAAGG GGCAGCACCT GCTGAACCTG
GTGCTGGGCC TGGCCACCGT CGGCCTGGGG CTGGTGTTCA TGCTCACCGA GCGCTGGGAT
GCCTTCTTCG CCATGCTGGC GCTCGCCTTC GTGATGGGCG TGCTCATCAT CATTCCCATC
GGCGGCGCCG ACATGCCCGT GGTGGTGTCC ATGCTCAACA GCTACTCGGG CTGGGCAGCG
GCGGGCATCG GCTTCTCGCT GAACAACAGC ATGCTCATCA TCGCGGGCTC GCTGGTAGGC
AGCTCGGGCG CGATCCTGAG CTACATCATG TGCAAGGCCA TGAACCGCTC GTTCTTCAAC
GTGATCCTGG GCGGCTTCGG CGGCGACGCG GCAGCTGCGG CCACGGGCGG CGGCGTGCAG
CGCACGGCCA AGAGCGGCAG CGCCGACGAT GCGGCCTTCA TCCTGAGCCA GGCGGAGACT
GTGGTCATCG TCCCCGGCTA CGGCCTGGCC GTGGCGCGCG CGCAGCATGC GGTGAAGGAG
CTGGCGCAAA AGCTCACCGA CAAGGGCATC ACCGTCAAGT ACGCCATCCA TCCGGTGGCG
GGCCGCATGC CCGGCCATAT GAACGTGCTG CTGGCCGAGG CCGAGGTGCC CTACGACCAG
GTGTTCGAGA TGGAGGACAT CAACGGCGAG TTCGGCCAGG CCGATGTGGC CATCGTGCTG
GGCGCCAACG ATGTGGTGAA CCCCGCCGCG CTGCACAAGG GCAGCCCCAT CTACGGCATG
CCGATCCTGG AGGCTTACAA GGCCAAGACC GTGATCGTCA ACAAGCGCTC CATGGCCGCG
GGCTACGCCG GCCTGGACAA CGAACTGTTC TACATGGACA AGACCATGAT GGTCTTCGGC
GACGCCAAGA AGGTGGTCGA AGACATTGGC AAGGCCGTGG AGTAG
 
Protein sequence
MSMNLVTLLY LVASVCFIQA LKGLSHPTTS IRGNLFGMAG MAIAVLTTAA LIVELASDKG 
VGMTYVLAGL VVGGGAGAVM AQRVEMTKMP ELVAFMHSMI GLAAVFIAVA AVAEPWAFQI
VAHGQPIPLG NRLELFLGAA IGAITFSGSV IAFGKLSGKY KFRLFQGAPV VFKGQHLLNL
VLGLATVGLG LVFMLTERWD AFFAMLALAF VMGVLIIIPI GGADMPVVVS MLNSYSGWAA
AGIGFSLNNS MLIIAGSLVG SSGAILSYIM CKAMNRSFFN VILGGFGGDA AAAATGGGVQ
RTAKSGSADD AAFILSQAET VVIVPGYGLA VARAQHAVKE LAQKLTDKGI TVKYAIHPVA
GRMPGHMNVL LAEAEVPYDQ VFEMEDINGE FGQADVAIVL GANDVVNPAA LHKGSPIYGM
PILEAYKAKT VIVNKRSMAA GYAGLDNELF YMDKTMMVFG DAKKVVEDIG KAVE