Gene Ajs_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3948 
Symbol 
ID4672502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4201823 
End bp4202809 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID639840990 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_988130 
Protein GI121596234 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.643158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA TCTTTACGCT CGCCAACGGC CGGCTCGTCC AGGAAGAGAT CGAGTCCCTG 
GAAGAGCTGG CGCGCTTTCA GCCGATCTGG GTGGACCTGG AGTCCCCCAC GCTGGAAGAA
AAGCGCTGGA TCAAGCAGCA CTACGGCCTG TCCATCCCCG AAGATGCGAT GGACGAGGAC
ATCGAGGAGT CCGCGCGCTT TTACGAGGAA GACAACGGCG AGCTGCACAT CCGCAGCGAC
TTTCTGGTGG ATGTGGACGA CGAGCCCGCC TCGGCCCGCG TGGCCTTCAT CCTGAACCTG
GTCAACGACA CCCTCAAGAG CAAGGGCGTG CTGTTTTCCA TCCACGACGA GGACATCCCC
GTCTTTCGCC TGCTGCGCAT GCGCGCGCGC CGCGCCCCCG GCCTGATCGA CGATGCCAAG
GACGTGCTGC TGAGCCTCTT CGACACCGAT GCCGAGTATT CCGCCGACAC GCTGGAGGGC
ATCTACGACG ACCTGGAGGA TGTGAGCACC CAGGTGCTGG CCGGCAACGT GACCGACGCA
CGCGCCAGCG AGGTGCTGGC GGCCATTGCG CGGCAGGAGG ACTTGAACGG CCGCATCCGC
CGCAACGTGA TGGACACGCG CCGCGCGGTG AGCTTCATGA TGCGCAGCCG CATGCTCAGC
TCCGAGCAGT TCGAGGACGC GCGCCAGATC CTGCGCGACA TCGAGTCGCT GGACAGCCAC
ACGGCCTTCC TGTTCGACAA GATCAACTTC CTGATGGACG CCACGGTCGG TTTCATCAAC
ATCAACCAGA ACAAGATCAT CAAGATCTTC TCCGTGGCCA GCGTGGCGCT GCTGCCGCCG
ACGCTGATCG CCAGCGTCTA CGGCATGAAC TTCAAGTTCA TGCCCGAGCT GGACTGGCAG
TACGGCTACC CCTACGTGCT GGCGCTGATG GTGGCCAGCG CGCTGGGGCC GATGCTGTAC
TTCCGCAAGC GGGGCTGGTT GAAATAG
 
Protein sequence
MLNIFTLANG RLVQEEIESL EELARFQPIW VDLESPTLEE KRWIKQHYGL SIPEDAMDED 
IEESARFYEE DNGELHIRSD FLVDVDDEPA SARVAFILNL VNDTLKSKGV LFSIHDEDIP
VFRLLRMRAR RAPGLIDDAK DVLLSLFDTD AEYSADTLEG IYDDLEDVST QVLAGNVTDA
RASEVLAAIA RQEDLNGRIR RNVMDTRRAV SFMMRSRMLS SEQFEDARQI LRDIESLDSH
TAFLFDKINF LMDATVGFIN INQNKIIKIF SVASVALLPP TLIASVYGMN FKFMPELDWQ
YGYPYVLALM VASALGPMLY FRKRGWLK