Gene Ajs_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3944 
Symbol 
ID4672921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4197655 
End bp4199502 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content68% 
IMG OID639840986 
Productaldehyde ferredoxin oxidoreductase 
Protein accessionYP_988126 
Protein GI121596230 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGG CTGGCAAGAT TCTGCGCGTC AACCTGAGCG CGGGCACCGT CACACCCGAA 
CCGCTGAACA TGGACTGGGC ACGCCAGTAC ATCGGTTCGC GCGGTCTCGG CAGCAAGTAC
CTGATCAGCG AGATCGACCC CAAGGTCGAT CCGCTGTCGC CGGACAACAA GATCATCTGG
GCCACGGGGC CGCTCACCGG CACCATGGCC TCCACCGGCG GGCGCTACAC CGTCATCACC
AAGGGGCCGC TGACCGGGGC CATCGCCTGC TCCAACTCCG GCGGCTACTG GGGCGCCGAG
CTGAAGATGG CCGGCTGGGA CATGGTCATC TTCGAGGGCA AGAGTCCGAA GCCCGTGTAT
CTGTACATCA ACGACGACCA GGCCGAGCTG CGCGACGCCG CCGACATCTG GGGCAAGAGC
GTGTGGGAGA CCGAGGAACA CCTCAAGACC ACGCTGCAGG ACCCGCTCAC GCGCATCTCC
GGCATTGGCC GCGCGGGCGA GAACCAGGTG CTGTTCGCCG CCGTGGTCAA TGACCTGCAC
CGCGCCGCCG GCCGCTCGGG CGTGGGCGCG GTCATGGGCA GCAAGAACCT CAAGGCGATT
GCCGTGCGCG GCACCAAGGG CGTGGGCAAC ATCCGCGACC CCAAGGCCTT CATGGCCGAG
ACCTTCGCGC GCAAGAAGAT CCTGCACGAC AACGCCGTCA CCGGCCAGGG CCTGCCCACC
TACGGCACGC AGGTGCTGAT GAACGTGATC AACGAGGTGG GCGCGCTGCC CACGCGCAAC
CACCGCGACG TGCAGTTCGA GGGCGCCAAG GACATCTCCG CCGAGGCCAT GGCCACGCCG
CGCGCCAGCG ACGGCAAGAA GCAGCTGGTG ACCAACCAGG CCTGCTTTGG CTGCACCATC
GCCTGCGGGC GCATCAGCAA GATCGACGAG ACGCACTTCA CCGTGCAGAA CAAGCCCCAG
TACTGGGGCG CCAGCGGCGG CCTGGAGTAC GAGGCGGCCT GGGCGCTGGG CGCGGCCAAT
GGCGTGAACG ACCTGGAATG CCTGCAGTAC GCCAACCTGC TGTGCAACGA GCAGGGCATC
GACCCGATCA GCTTCGGCGC CACCGTGGGC GCGGTGATGG AGCTGTACGA GATGGGCGTT
TTATCCAAGG AGCAGATCGG CATCGCGGCG CCGTTCGGCT CGGCCGAGGC CCTGGCCTTC
CTGGCCGAGG AGACGGTGAA CGGCCGCGGC TTCGGCAAGG AGGTGGGCCA GGGCTCCCGG
CGCCTGTGCA CCAAGTACGG CCACCCCGAG CTGTCCATGA CCTCCAAGAG CCAGGAGTTC
CCGGCCTACG ACGGCCGCGC CATCCAGGGC ATCGGCCTGG CCTACGCCAC CAGCAACCGC
GGCGGCTGCC ACCTGCGCGG CTACACCATC GCCTCCGAAA TCCTGGGCAT TCCGGTCAAG
ACCGAGCCCA CGGCCAGCGA GGGCAAGCCC GAGCTGGTCA AGGCTTTCCA GGATGCGACG
GCGGCCTTCG ACTCGGCAGG GGTGTGCGTG TTCACCACCT TCGCCTGGAG CCTGCCCGAC
CTCGCCCCCC AACTGCAGGC GGCCTGCGAC GAGGGCTACA CGGTGCAGGA GCTGGAGAAG
ATCGGCGAGC GCATCTGGAA CATGGAGCGC GAGTTCAACA ACGCCGCCGG CTTCACCAAG
GCGGACGACA GCCTGCCCCG GCGCCTGCTG ACCGAGGCGG CCAAGACCGG CGGCTCCAAG
GGCACGGTGA GCCACCTGCC CGAAATGCTG CCCAAGTATT ACGCCGTGCG CGGCTGGGAC
CCCGAAGGCC GGCCCACGCC CGAAACGCGC GCGCGCCTGG GACTGTGA
 
Protein sequence
MSWAGKILRV NLSAGTVTPE PLNMDWARQY IGSRGLGSKY LISEIDPKVD PLSPDNKIIW 
ATGPLTGTMA STGGRYTVIT KGPLTGAIAC SNSGGYWGAE LKMAGWDMVI FEGKSPKPVY
LYINDDQAEL RDAADIWGKS VWETEEHLKT TLQDPLTRIS GIGRAGENQV LFAAVVNDLH
RAAGRSGVGA VMGSKNLKAI AVRGTKGVGN IRDPKAFMAE TFARKKILHD NAVTGQGLPT
YGTQVLMNVI NEVGALPTRN HRDVQFEGAK DISAEAMATP RASDGKKQLV TNQACFGCTI
ACGRISKIDE THFTVQNKPQ YWGASGGLEY EAAWALGAAN GVNDLECLQY ANLLCNEQGI
DPISFGATVG AVMELYEMGV LSKEQIGIAA PFGSAEALAF LAEETVNGRG FGKEVGQGSR
RLCTKYGHPE LSMTSKSQEF PAYDGRAIQG IGLAYATSNR GGCHLRGYTI ASEILGIPVK
TEPTASEGKP ELVKAFQDAT AAFDSAGVCV FTTFAWSLPD LAPQLQAACD EGYTVQELEK
IGERIWNMER EFNNAAGFTK ADDSLPRRLL TEAAKTGGSK GTVSHLPEML PKYYAVRGWD
PEGRPTPETR ARLGL