| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3939 |
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| Symbol | |
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| ID | 4673968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4193452 |
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| End bp | 4194933 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639840981 |
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| Product | D-alanyl-D-alanine carboxypeptidase PBP3 |
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| Protein accession | YP_988121 |
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| Protein GI | 121596225 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCCC CTAAACTCGC CGCCATGTCG TTTTCTTTCC TTGGGCAGGC CCGCCGCCTG
CGCTGTGCGG CCGGGTGGGC GCTGGCCCTG GCCTTCCTGA CGCCCTGGGC GGGCGCCCAG
CCTGTGCCCG CCGATGCATC GGCCTTGCCC CCTTCCGTCG AAGCCGCGCT GCAGCGCGCC
AAGGTGCCGC GCGAAGCACT CTCCGCCTTG GTGGTGGAGG TCGAGGGGCG CCAGCCGCGC
CTGGCCCACC GCGCCGATGC GCCCGCCAAC CCGGCCTCGG TCATGAAGCT TGTCACGACG
TATGCGGCGC TGGACCTGCT GGGGCCGGCA TTCACCTGGG ACACGCACGT GTACCTGGAC
GCCGCGCCCC AGGGCGGCAG CCTGCGCGGC AACGTGTACA TCAAGGGGCA GGGCGACCCC
AAGCTGGTGG TGGAGCGCCT GTGGTTGCTC ATGCGCCGCC TGCGTGCGAC GGGGGTCGAG
GTGATCCTGG GCGACATCGT GCTGGACCGC AGCGCCTTCG CGCTGCCGGC GCACGATCCG
GCGCTGTTCG ACGGCGAGCC CTGGCGCCCC TACAACGCCG CACCCGACGC GCTGCTGCTC
AACTACAAGG CGGTGTCCAT CGGCTTCGTG CCGGATCTGG CGGCCGGCGT GGCGCGGCTG
CGCTATGAGC CGCCGCTGGC CCAGGTGGAA CTGCCCGCCA CCGTGCCGCT GGCGGCGCAG
GGCGCGGCCT GCGGCGATTG GCGTGCAGGG CTGCGGGCGG ATTTCGCGGA CCCTGCGCGC
ATCGCCTTCC AGGGCGTGTA CCCGGCGGCC TGCGGCGAAC GCGAGTGGTC CATCGCACCG
GCCGACCCGG GCGGCTATGC GGCGCGCGCG GTGGAAGGCA TGTGGCGCGA ACTGGGCGGC
AAGCTCACCG GCCGCGTGCG CGACGGCAAG GTGCCCGCGG GGCTGGCGCC GGCATTCGGC
AGTACCTCGC CGCCGTTGTC GGAGGTGGTG CGCGACATCA ACAAATACAG CAACAACGTC
ATGACGCAGC AGGTGTTTTT GACGCTGGGG CTGCAAAAAG CCGGCGCAGG CAGCTTCGAC
CAGGCGCGCA GCGTGCTCGC ACAGTGGTGG CGCCAGCGCC TGGGCGCCGC CGAGATGCCG
GTGGTGGACA ACGGCGCCGG CTTGAGCCGT GAGGCGCGCG TGAGCGCGCG GGCGCTTGCG
CGCATGCTGC AGCATGCCTG GGCGTCGCCA GTGATGCCGG AATTCATGGC ATCGCTGCCC
ATTGCCGGGG TGGACGGGAC GCTGCGCCGC CGCCAGGGCC AGGCTGCGGG CTTCGCGCAC
CTCAAGACGG GTGCGCTGCG CGACGTGGTG GCGCTGGCCG GCTATGTGCA TGCCGCGGGC
GGCCGGCGCT ATGTGCTGGT GGGCTTCGTC AACCACCCAA ATGCCTCCGC GGCACGACCG
GCCCTGGACG CGCTGGTGGA CTGGGCCGCG AGCGACCGCT GA
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| Protein sequence | MAPPKLAAMS FSFLGQARRL RCAAGWALAL AFLTPWAGAQ PVPADASALP PSVEAALQRA
KVPREALSAL VVEVEGRQPR LAHRADAPAN PASVMKLVTT YAALDLLGPA FTWDTHVYLD
AAPQGGSLRG NVYIKGQGDP KLVVERLWLL MRRLRATGVE VILGDIVLDR SAFALPAHDP
ALFDGEPWRP YNAAPDALLL NYKAVSIGFV PDLAAGVARL RYEPPLAQVE LPATVPLAAQ
GAACGDWRAG LRADFADPAR IAFQGVYPAA CGEREWSIAP ADPGGYAARA VEGMWRELGG
KLTGRVRDGK VPAGLAPAFG STSPPLSEVV RDINKYSNNV MTQQVFLTLG LQKAGAGSFD
QARSVLAQWW RQRLGAAEMP VVDNGAGLSR EARVSARALA RMLQHAWASP VMPEFMASLP
IAGVDGTLRR RQGQAAGFAH LKTGALRDVV ALAGYVHAAG GRRYVLVGFV NHPNASAARP
ALDALVDWAA SDR
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