Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3934 |
Symbol | |
ID | 4673775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4188875 |
End bp | 4189372 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639840976 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_988116 |
Protein GI | 121596220 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.476774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCCA TCCAGATCGG CGTGGTCATG GGCTCCAGCA GCGACTGGGA GACCATGCAG CACGCAGTTG CCATCCTCCA GCAATTCGGC ATCGCGCACG AGGCGCAGGT GGTCTCCGCC CACCGCATGC CCGACGACAT GTTCCGCTAC GCCGAGGCCG CGGCCGGCCG GGGCCTGAAG GCCATCATCG CGGGCGCCGG CGGCGCCGCG CACCTGCCCG GCATGATCGC CGCCAAGACC ACCGTGCCGG TGCTGGGCGT GCCGGTCGCC AGCCGCCACC TGCAGGGAGT GGACTCGCTG CACTCCATCG TGCAGATGCC CAAGGGCGTG CCCGTGGCCA CGTTCGCCAT CGGCGCGGCC GGCGCGGCCA ACGCGGCGCT GTTCGCCGTG GCGCTGCTGG CGGGCGAGAA CCCGGCGCTG CGCGAGCAGC TGGACGCCTT CCGCGCCGAG CAGACCGCCG CCGCGCGCGC CATGACGCTG CCGCCGGTGT CCGCATGA
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Protein sequence | MNPIQIGVVM GSSSDWETMQ HAVAILQQFG IAHEAQVVSA HRMPDDMFRY AEAAAGRGLK AIIAGAGGAA HLPGMIAAKT TVPVLGVPVA SRHLQGVDSL HSIVQMPKGV PVATFAIGAA GAANAALFAV ALLAGENPAL REQLDAFRAE QTAAARAMTL PPVSA
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