Gene Ajs_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3934 
Symbol 
ID4673775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4188875 
End bp4189372 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content73% 
IMG OID639840976 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_988116 
Protein GI121596220 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.476774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCA TCCAGATCGG CGTGGTCATG GGCTCCAGCA GCGACTGGGA GACCATGCAG 
CACGCAGTTG CCATCCTCCA GCAATTCGGC ATCGCGCACG AGGCGCAGGT GGTCTCCGCC
CACCGCATGC CCGACGACAT GTTCCGCTAC GCCGAGGCCG CGGCCGGCCG GGGCCTGAAG
GCCATCATCG CGGGCGCCGG CGGCGCCGCG CACCTGCCCG GCATGATCGC CGCCAAGACC
ACCGTGCCGG TGCTGGGCGT GCCGGTCGCC AGCCGCCACC TGCAGGGAGT GGACTCGCTG
CACTCCATCG TGCAGATGCC CAAGGGCGTG CCCGTGGCCA CGTTCGCCAT CGGCGCGGCC
GGCGCGGCCA ACGCGGCGCT GTTCGCCGTG GCGCTGCTGG CGGGCGAGAA CCCGGCGCTG
CGCGAGCAGC TGGACGCCTT CCGCGCCGAG CAGACCGCCG CCGCGCGCGC CATGACGCTG
CCGCCGGTGT CCGCATGA
 
Protein sequence
MNPIQIGVVM GSSSDWETMQ HAVAILQQFG IAHEAQVVSA HRMPDDMFRY AEAAAGRGLK 
AIIAGAGGAA HLPGMIAAKT TVPVLGVPVA SRHLQGVDSL HSIVQMPKGV PVATFAIGAA
GAANAALFAV ALLAGENPAL REQLDAFRAE QTAAARAMTL PPVSA