Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3923 |
Symbol | |
ID | 4674023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4178830 |
End bp | 4179381 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639840965 |
Product | SmpA/OmlA domain-containing protein |
Protein accession | YP_988105 |
Protein GI | 121596209 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAAC CCATGTTTGC ACCCGCCCGT TGGGGCGCCC GCTGGGGCGC CATTGTGTTG ATTGGTGCCG GGATGGCCGG CTGCGCGGGC ACCGGCAGTC GCCTGGCCGG CATGGTCACG CCCTACAAGG TGGACGTGGT GCAGGGCAAC TTCATCTCGC GCGAGCAGGT GCAGATGTTG CAGCCTGGCA TGGGCCGCCA GCAGGTGCGT GAGATCCTGG GCACACCCCT CATGGTGAGC GTGTTCCACT CCGACCGCTG GGAATACGTC TTCACCCTCA AGCGCCCCGA TTTCGAGGTG CAGACGCGCA AGCTCACCGT GTTCTTCAAG GACAACGTGA TGGAGCGTGT CGAAGGCGAC GAGATGCCTA CCGAGGCCGA GTTCGTGGCC TCGCTCTCCA CCAAGGTGTC CAAGCCCAAG GTGCCGCAGC TTGAGGCCAC CGAGGCGCAG CTCGCGCGCT TTCCCAAGGC GGAGCCGGCC GCCGAGCCGG CCGCCGCGCC CGCTCTGCCA CCCGCCACGA GCTATCCGCC GCTGGAATCT CCGCGCCGTT GA
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Protein sequence | MHKPMFAPAR WGARWGAIVL IGAGMAGCAG TGSRLAGMVT PYKVDVVQGN FISREQVQML QPGMGRQQVR EILGTPLMVS VFHSDRWEYV FTLKRPDFEV QTRKLTVFFK DNVMERVEGD EMPTEAEFVA SLSTKVSKPK VPQLEATEAQ LARFPKAEPA AEPAAAPALP PATSYPPLES PRR
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