Gene Ajs_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3921 
Symbol 
ID4673648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4177265 
End bp4177924 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID639840963 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_988103 
Protein GI121596207 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCC TGCACTGGTT GCGTCAGGGT GATGCGGTCA CGCAGGCGTC GGCGCTGCTG 
CTGCTGGCCA TGTCGGTTGC CAGCTGGGTG GTGATTTTCT GGAAGCTGCG CCTGATGCGG
CGCGCCCATG TGGACGTGCC GCGCAGCACG GCCGCGTTCT GGCAGGCGCC GTCGCTGGCC
GCGGCGGCCG AGCGTCTGCC CGCCTTTGAC CGTGAAGGGC TGGTGCTGCC GCTGGTGCGT
GCCGCGCAGC AGGTGGAGCA GGCCGGCGCG GCCACGCTGG CCGGGCAGGG CGGCCTGTCG
CAGCGGCTCA CGCGCGTGTT GCGCGATGCG CTGCATGGCG TGCTGGGCAA GCTGCAGTTC
GGCCAGGTGC TGCTGGCCAC CGTGGGCTCC ACGGCGCCGT TCGTGGGGCT GCTGGGCACG
GTGTGGGGCA TCTACCATGC GCTCACGGCC ATGGCCGGCG CGGGGCAGAT CAGCATCGAG
CGCGTCGCCG GCCCGGTGGG CGAAGCACTC ATCATGACGG CCGCGGGCCT CACGGTGGCG
ATCCCCGCTG TGCTGGCCTA CAACTGGTTC GGGCGTGTCA TCGGCCGCAT CGAGGCCGAC
CTCGAAGGCT TTGCCCGCGA CCTGCGCGAG CTGGTCATCG ACACCAACGC CGCCGACTAG
 
Protein sequence
MDSLHWLRQG DAVTQASALL LLAMSVASWV VIFWKLRLMR RAHVDVPRST AAFWQAPSLA 
AAAERLPAFD REGLVLPLVR AAQQVEQAGA ATLAGQGGLS QRLTRVLRDA LHGVLGKLQF
GQVLLATVGS TAPFVGLLGT VWGIYHALTA MAGAGQISIE RVAGPVGEAL IMTAAGLTVA
IPAVLAYNWF GRVIGRIEAD LEGFARDLRE LVIDTNAAD