Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3921 |
Symbol | |
ID | 4673648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4177265 |
End bp | 4177924 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639840963 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_988103 |
Protein GI | 121596207 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGCC TGCACTGGTT GCGTCAGGGT GATGCGGTCA CGCAGGCGTC GGCGCTGCTG CTGCTGGCCA TGTCGGTTGC CAGCTGGGTG GTGATTTTCT GGAAGCTGCG CCTGATGCGG CGCGCCCATG TGGACGTGCC GCGCAGCACG GCCGCGTTCT GGCAGGCGCC GTCGCTGGCC GCGGCGGCCG AGCGTCTGCC CGCCTTTGAC CGTGAAGGGC TGGTGCTGCC GCTGGTGCGT GCCGCGCAGC AGGTGGAGCA GGCCGGCGCG GCCACGCTGG CCGGGCAGGG CGGCCTGTCG CAGCGGCTCA CGCGCGTGTT GCGCGATGCG CTGCATGGCG TGCTGGGCAA GCTGCAGTTC GGCCAGGTGC TGCTGGCCAC CGTGGGCTCC ACGGCGCCGT TCGTGGGGCT GCTGGGCACG GTGTGGGGCA TCTACCATGC GCTCACGGCC ATGGCCGGCG CGGGGCAGAT CAGCATCGAG CGCGTCGCCG GCCCGGTGGG CGAAGCACTC ATCATGACGG CCGCGGGCCT CACGGTGGCG ATCCCCGCTG TGCTGGCCTA CAACTGGTTC GGGCGTGTCA TCGGCCGCAT CGAGGCCGAC CTCGAAGGCT TTGCCCGCGA CCTGCGCGAG CTGGTCATCG ACACCAACGC CGCCGACTAG
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Protein sequence | MDSLHWLRQG DAVTQASALL LLAMSVASWV VIFWKLRLMR RAHVDVPRST AAFWQAPSLA AAAERLPAFD REGLVLPLVR AAQQVEQAGA ATLAGQGGLS QRLTRVLRDA LHGVLGKLQF GQVLLATVGS TAPFVGLLGT VWGIYHALTA MAGAGQISIE RVAGPVGEAL IMTAAGLTVA IPAVLAYNWF GRVIGRIEAD LEGFARDLRE LVIDTNAAD
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