| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3903 |
|---|
| Symbol | secE |
|---|
| ID | 4672021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 4149661 |
|---|
| End bp | 4150044 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639840937 |
|---|
| Product | preprotein translocase subunit SecE |
|---|
| Protein accession | YP_988086 |
|---|
| Protein GI | 121596190 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0690] Preprotein translocase subunit SecE |
|---|
| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAT CCCAGGTTGA GACGGTCACG ACTGGTGCGG ACAAGGCAAA GTTGTTCGCG
GCAGTGGCGA TTGTTCTTGC GTCCATTGCC GGTTTCTATT TGCTGGGTAA GCAAGGGCCC
CTCATTCAAT GGGGTGTGTT GCTGTTGGGG CTAGTGCTGG CTGTGGCGGT TTTTCTCGTT
TCCGAGCATG GACGCCAGTT CGTCGGGTTT GCAAACGATG CGTGGCGTGA GGTTAAGAAG
GTTGTCTGGC CCACGCGCAA GGAAACGCTG CAAATGACGG GCTATGTGTT CGCTTTTGTG
GTGGTGATGG CGCTGTTCCT TTGGTTCACG GACAAGACCT TGGAATGGGT TCTGTACGAC
TTGATCTTGG GCTGGAGGAA GTGA
|
|---|
| Protein sequence | MATSQVETVT TGADKAKLFA AVAIVLASIA GFYLLGKQGP LIQWGVLLLG LVLAVAVFLV
SEHGRQFVGF ANDAWREVKK VVWPTRKETL QMTGYVFAFV VVMALFLWFT DKTLEWVLYD
LILGWRK
|
|---|
| |