Gene Ajs_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3872 
Symbol 
ID4672522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4113074 
End bp4114234 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content72% 
IMG OID639840905 
Producthypothetical protein 
Protein accessionYP_988055 
Protein GI121596159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.54526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG CATTGCGACT GTCGGAGAAA TGGTTTCGCC GCGGCCTGTG GCTGGTGGCG 
CTGGTGTTCG CCAGCTTTCT GATCGGGCTG GGCGGCACCA TCGTGGGCGA CCTGCCCAAG
GTGGAGGCGC CCCTGCAGCT GGACGACTTC CTGGACCGCA ACGCCGCCCA GGCGCTGCGC
GCCCAGGTCA AGGAAGCGCG CCAGGCCGAG CAGGAGGCCC AGACCGCGCT GGAGCAGGCC
CGGCTGCAGC ACGCCAAGGC GCGCAGCGAG ACGCAGGCCG AGCGCGAGAC CTTCAGCAAC
TGGCTGGCCG CACGCCGCGC CACCCAGCGC GCCGAGCACG ACCCCGAGGT GATCGCGCGC
ACCCAGGCGC TGGACGCCCT CAAGGCCCAG GAGCGCCGGG CCCAGCAGGC CGTGCAGGCG
CAGGATCAAG CCCTGCTGGA CGCGCGCCAG GCCGCGCAGG CCGCGCAGCA GCGCCTGGGG
CGCCTGGAGC AGGGCGGCTA CGAGAAGATG GCCGCCGAGC GGCGCAAGGT GGAGTTGCGC
GTGTTCCTCT ACCGCCTGGC GCTCACGCTG CCGCTGCTGG TGGCGGCAGG CTGGCTGTTC
GCCAAAAAGC GCAAGAGCAC CTGGTGGCCG TTCGTGTGGG GCTTCATCTT CTTCGCGGTG
TTCGCGTTCT TCGTGGAGCT GGTGCCCTAC CTGCCCAGCT ATGGCGGCTA TGTGCGCTAC
GTGGTGGGCA TCGTGGTCAC GGCGCTGGTG GGGCGCTACG CCATCCTTGC GCTCAACCAC
TACCTGGAAC GCCAGAAACA GGCCGAGGCC CTGCCCGAGC AGGAGCGCCG CAAGGAGCTG
GGCTACGACA TGGCCCTGGC GCGCCTGGCC AAGGGCGTGT GCCCGGGGTG CGAACGGCTG
GTGGACCTGA AGGACGGGGT GACCGACTTC TGCCCGCACT GCGGCATCGG CCTGTTCGAC
CGCTGCGGTG CCTGCGGCAC GCGCAAGAGC GCCTTCGCCC GTTTCTGCCA TGCCTGCGGG
GCCGGTGCGG CGCCGTCCGG GATGGCCTCG CCCGGTGTGG CCCCTGCGGG TGCGGTCCCC
TCGGGCATGC CGCCCGCCGG CGCGGCCCCC GCCGGTACGC CACCCCAGGG TGCGATGCCC
GGCGCGGCAG GGAATCGCTA G
 
Protein sequence
MSKALRLSEK WFRRGLWLVA LVFASFLIGL GGTIVGDLPK VEAPLQLDDF LDRNAAQALR 
AQVKEARQAE QEAQTALEQA RLQHAKARSE TQAERETFSN WLAARRATQR AEHDPEVIAR
TQALDALKAQ ERRAQQAVQA QDQALLDARQ AAQAAQQRLG RLEQGGYEKM AAERRKVELR
VFLYRLALTL PLLVAAGWLF AKKRKSTWWP FVWGFIFFAV FAFFVELVPY LPSYGGYVRY
VVGIVVTALV GRYAILALNH YLERQKQAEA LPEQERRKEL GYDMALARLA KGVCPGCERL
VDLKDGVTDF CPHCGIGLFD RCGACGTRKS AFARFCHACG AGAAPSGMAS PGVAPAGAVP
SGMPPAGAAP AGTPPQGAMP GAAGNR