| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3870 |
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| Symbol | tgt |
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| ID | 4672402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4111075 |
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| End bp | 4112247 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840903 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_988053 |
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| Protein GI | 121596157 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.41663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.550256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGT TTGAAATCCT GGCCACCGAC ACCTCCAGCC ACGCGCGCCG CGGCAAGCTC
ACGCTCAACC ACGGCGTGGT GCAGACCCCC ATCTTCATGC CCGTGGGCAC CTACGGCACC
GTCAAGGGCG TGATGCCGCG CAGCCTGCGC GAGATGGGCG CGCAGATCAT CCTGGGCAAC
ACCTTCCACC TGTGGATGCG CCCCGGCCTG GACGTGATGC AGAGCTTTGG CGGCCTGCAC
GGCTTCGAGC AGTGGGACAA GCCCATCCTC ACGGACTCGG GCGGGTTCCA GGTCTGGAGC
CTGGGCAGCA TGCGCAAGAT CACCGAAGAA GGCGTGCATT TCGCCTCGCC CGTGAACGGC
GACAAGCTGT TCATGTCGCC CGAGGTGAGC ATGCAGATCC AGACCACGCT CAACAGCGAC
ATCGTGATGC AGCTGGACGA GTGCACGCCC TACGAGACCA ACGGTCACAA GACCACCGAG
GCCGAGGCGC GCAAGAGCAT GGAGATGAGC CGCCGCTGGG CGGTGCGTTC CAAGAATGAA
TTCGAGCGCC TGGGCAACCC CAACGCGCTG TTCGGCATCG TGCAGGGCGG CATGTACAAG
AACCTGCGCC AGGAATCGCT CGAAGCCCTG GTGGAGATGG ACTTCCCCGG CTACGCCGTG
GGCGGCGTGA GCGTGGGCGA GCCCAAGGAC GAGATGCTGG ACATCATGGC GCACACCCCC
CACCGCCTGC CCGCGCACAA GCCCCGCTAC CTGATGGGTG TGGGCACGCC GGAGGACCTG
GTGGAGGGCG TGGCCCAGGG CGTGGACATG TTCGACTGCG TGATGCCCAC GCGCAATGCG
CGCAACGGCA CGCTGTTCAC GCGCTATGGC GACCTGAAAA TCCGCAACGC CCGCCACAAG
ACCGACCACC AGCCGCTGGA CCCAAGCTGC ACCTGCCACG CCTGCGCGGG CACCGAGGGC
GTAAGCTGGA ACGACGGGGG CCGCGGCGGC TTCTCGCGCG CCTACCTGCA CCACCTGGAC
CGCTGCGGCG AGATGCTGGG GCCCATGCTC ACCACCATCC ACAACCTGCA CTACTACCTG
AACCTGATGC GCGAGGTGCG CGAAGCGCTG GACGCCGGCC AGTTCGGCGC ATTCCGCGCG
CGCTTCAAGG CCGAGCGCGC ACGCGGCGTA TAG
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| Protein sequence | MLKFEILATD TSSHARRGKL TLNHGVVQTP IFMPVGTYGT VKGVMPRSLR EMGAQIILGN
TFHLWMRPGL DVMQSFGGLH GFEQWDKPIL TDSGGFQVWS LGSMRKITEE GVHFASPVNG
DKLFMSPEVS MQIQTTLNSD IVMQLDECTP YETNGHKTTE AEARKSMEMS RRWAVRSKNE
FERLGNPNAL FGIVQGGMYK NLRQESLEAL VEMDFPGYAV GGVSVGEPKD EMLDIMAHTP
HRLPAHKPRY LMGVGTPEDL VEGVAQGVDM FDCVMPTRNA RNGTLFTRYG DLKIRNARHK
TDHQPLDPSC TCHACAGTEG VSWNDGGRGG FSRAYLHHLD RCGEMLGPML TTIHNLHYYL
NLMREVREAL DAGQFGAFRA RFKAERARGV
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