| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3854 |
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| Symbol | |
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| ID | 4671260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4090700 |
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| End bp | 4092916 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639840887 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_988037 |
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| Protein GI | 121596141 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGCC TTCGCCTCTT GCAGCGCTCC CTGCACACTC TTTTTTTCAT AGCTGCTTGC
GCTGTATCCA CGGGCGCCAT CGGCCAAATT CAACTCAAGA CAACCGCCGC CGCGGGCAGC
AGCAGCGTCG TCACGCCGCA TGTGCGCGCC GAGCTGGTCG CCCAGGCGCC CGACGGCGTG
GGCCCGGGCA AGCCGCTGTG GCTGGGCCTG TCGATCACGC ACCAGCCCGA GTGGCACACC
TACTGGAAGA ACCCGGGCGA CTCCGGCCTG CCCACGCAAC TGGAGTGGCA GCTGCCGGCA
GGCATCGACG CGGGCGAGGT CGCCTGGCCC GTGCCCAAGA AGATTCCGCT GGGCAACCTG
GCCAACTACG GCTACGTGGG CACGGTGCTG TTGCCCGTGC CCATGACCGT CTCCCCAGCA
TTCAACCCCG GCCCGCTGGC CAAGGAAGCG ACCTTCCAGC TCAAGGCCTC GTGGCTGGTG
TGCCGCCAGG AGTGCATCCC CGAAGAGGGC AGCTTCACGC TGCAGCTGCC CTTGCGCGGC
ACGACGGCGC TGCATGCCGC CGCGTTCGAT GCCGCCGCCG CGGCGCACCC GCGCGATCTG
CCGGCTCTAG GCGGCAGCAG CGCACAGGTC GAGGGCGACA CCGTGCTGCT GCGCGTGGCC
GGCCTGCCCC CGGCGCTGCA GGGCCAGACG CTGGAGGTGT TCCCCGAGAC CACGGGCGTG
GTGGAGACCG CCGCCACGCC CACGCAGCAG TGGGACGGCG CGGTGTGGAC CGCGCGCCTG
CCGCTGTCGC CCCAGCGCAG CGACGGGCCC GTGCCGATGC CGGTGGTGCT GGCCCATGGC
GGCCAGGGCT GGCGTGCCGA GCTGCCCGTG CCGGGCGGCT GGCCCGCCGT GGCGGCACTG
AAGGGCATGT CGCCCGCGCT GGAGGCCGCG CTGAAAGCCA ACGCCGCCAA TGCCGCCGCG
CCCGCGGCCC CCGCCGCTGC GACACCCGCG CCGCTGGGCA CCTGGCTGGC CGCGCTGGCC
GGTGCGCTGC TGGGCGGGCT GATCCTGAAC CTCATGCCCT GCGTGTTCCC GGTGCTGGCA
ATCAAGGTGG TGGGCTTTGC GCGCCATGCG CAGAACCAGC GCGCCCACCG CATCGGCGGG
CTGGCCTACA CCGCGGGCGT GGTGCTGTCG TTCCTGCTGC TGGGCGCGCT GATGCTGGGC
CTGCGCTCCG CGGGTGAGGC CGTGGGCTGG GGCTTTCAGC TGCAGTCGCC GGCGGTGGTG
GCGTCGCTGG CCGCGCTGTT CACGCTGATC GGATTGAACC TGGCGGGCGT CTTCGAGTTC
GGGCGCATGC TGCCCTCGTC GCTGGCGGGC CTGCAGGCGC GCCACCCCGT GCTGGATGCC
TTCCTGACCG GCGTGCTCGC CGTGGCCGTG GCCTCGCCGT GCACGGCGCC GTTCATGGGC
GCATCGCTGG GCCTCACGGC CACGCTGCCC GCGGGGCAGG CACTGTCGAT CTTCGCGGCG
CTGGGCCTGG GCCTGGCCCT GCCCTACCTG CTGGCAAGCT GGCTGCCCGC GTTTGCGCGC
GCCCTGCCGC GGCCGGGCGC GTGGATGGAC ACGCTGCGCC GCCTGCTGGC GTTCCCGATG
TTCGCCACCG TGGTGTGGCT GGTGTGGGTG CTGGGCCAGC AAAGCGGCAT CAACGGCGCG
GCGGCGCTGC TGGCGCTGCT GGTGGCGCTC AGCATGGCCG TGTGGGCGCT CACGCTGCGC
GGGGCCACGC GGGCTGTTCT CGCTCCGCTT TCAATAGCTG CTTGCGCTTG GCTGGCATGG
CTTTGGGGTC CAAAGATCAT TGAACTGGAA AGCGCACCCA TGGCCGCGGC CTCGGCCCCC
AGCGGCGTGG CCGGCGTGAC ATCCTGGCAG CCCTGGCGCC CTGGCCTGGC CGACGAGCTG
GTGGCCCAGG GCCGCCCGGT GTTCGTGGAC TACACGGCCG CCTGGTGCGT GACCTGCCAG
TACAACAAGA ACACCACGCT GGCCAGCGCC GCGGTGCTGC AGGACTTTGC AACGAAGAAC
GTGGCCCTGC TGCGCGCCGA CTGGACGCGG CGCGACCCCG CCATCACCGC CGCGCTGGCG
CAGCTCGGCC GCAGCGGCGT GCCGGTGTAT GTGCTGCATG CGCCGGGCAA GGCGCCGGTG
GTGTTCTCCG AGATCCTGGG CGAGTCGGAA CTGCGCGCCG CTGTGGCCGC GCTCTGA
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| Protein sequence | MSCLRLLQRS LHTLFFIAAC AVSTGAIGQI QLKTTAAAGS SSVVTPHVRA ELVAQAPDGV
GPGKPLWLGL SITHQPEWHT YWKNPGDSGL PTQLEWQLPA GIDAGEVAWP VPKKIPLGNL
ANYGYVGTVL LPVPMTVSPA FNPGPLAKEA TFQLKASWLV CRQECIPEEG SFTLQLPLRG
TTALHAAAFD AAAAAHPRDL PALGGSSAQV EGDTVLLRVA GLPPALQGQT LEVFPETTGV
VETAATPTQQ WDGAVWTARL PLSPQRSDGP VPMPVVLAHG GQGWRAELPV PGGWPAVAAL
KGMSPALEAA LKANAANAAA PAAPAAATPA PLGTWLAALA GALLGGLILN LMPCVFPVLA
IKVVGFARHA QNQRAHRIGG LAYTAGVVLS FLLLGALMLG LRSAGEAVGW GFQLQSPAVV
ASLAALFTLI GLNLAGVFEF GRMLPSSLAG LQARHPVLDA FLTGVLAVAV ASPCTAPFMG
ASLGLTATLP AGQALSIFAA LGLGLALPYL LASWLPAFAR ALPRPGAWMD TLRRLLAFPM
FATVVWLVWV LGQQSGINGA AALLALLVAL SMAVWALTLR GATRAVLAPL SIAACAWLAW
LWGPKIIELE SAPMAAASAP SGVAGVTSWQ PWRPGLADEL VAQGRPVFVD YTAAWCVTCQ
YNKNTTLASA AVLQDFATKN VALLRADWTR RDPAITAALA QLGRSGVPVY VLHAPGKAPV
VFSEILGESE LRAAVAAL
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