Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3849 |
Symbol | |
ID | 4670608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4085574 |
End bp | 4086752 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840882 |
Product | putative UreA/short-chain amide ABC transporter |
Protein accession | YP_988032 |
Protein GI | 121596136 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.375619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCC CCGTCCACCT CACTCCGCGT CCCCTGACCC GCGCCTGCCG CGCGCTGTGC ACGGGCCTTG CCCTGCTGGC CGCCACGGCC ACCGTCACCG CCCAGGACAC GGCAATTTCT GACGACGTGG TGCGCCTGGG CATCCTCACC GATCTGAACG GTCCGTTCGC CGACATCACC GGCCCAGGCA GCGCCGCCGC CATCCAGATG GCCATCGACG ACTTCGGCGG CAAGGTAGCG GGCAAGAAGA TCGAACTGGT GGTGGCCGAT CACCAGAACA AGGCCGACAT CGCCTCCAGC AAGGCGCGCG AGTGGTTCGA TACCGGCAAG GTGGACGCCA TCATGGACGT GGCCGTCTCC GCGCCGGCGC TGGCGGTGCT GGAGGTGGCC AAGCAAAAGC AGAAGGTCGT CATCTTCAAC GGCCCCGGCC TGGACCGCCT CACGGGCGAC CTGTGCATGC CCAGCACCGT GCACTACGTG TACGACACCT ACGCCCTGGC CAACGTAACG GCCAGCGCCA TCACCGCACG CGGCGGAAAG GACTGGTTCT TCATCACCGC CGACTACGCC TTCGGGCACA GCCTGCAGGA GCAGGCCAGC GCCGTGGTCA CGGCCCAGGG CGGCAAGGTG CTGGGCGCGG CCCGCCACCC GATCGCGGCG ACCGACTTCG CCTCGTTCCT GATCAGCGCG CAGAACAGCA AGGCCCAGGT CGTGGGCCTG GCCAACGCGG GGGGCGATAC GGTGAACACC ATCAAGGCCG CGCGTGAGTT CGGCCTGACC ACGGGCAAGA ACAAACAGAC CCTGGCCGGC CTGCTCATGT ACATCAACGA CATCCACGCC ATCGGCCTGC GCACCGCCGG CGGCCTGATG CTGACCGAGG GCTTCTACTG GGACATGAAC GACGAGACGC GGGCCTGGTC CAAGCGCTAC TTCGAGAAGA TGAAGAAGAT GCCCAACATG AGCCAGGCGG GCGCCTATTC CTCGACCATG CATTACCTGA AGGCCGTGCA GGCCGCCAAG ACCGACGACA CGGCCCAGGT CATGGCCAAG ATGAAGGCCA CACCCATCAA CGACTTCTTC GCCAAGAACG GCCGCATCCG CGAGGACGGC CGCATGGTGC ATGACATGTA CCTGTTCGAG GTCAAGTCGC AGGCCGAGTC CAAGTACCCG TGGGACTAG
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Protein sequence | MNRPVHLTPR PLTRACRALC TGLALLAATA TVTAQDTAIS DDVVRLGILT DLNGPFADIT GPGSAAAIQM AIDDFGGKVA GKKIELVVAD HQNKADIASS KAREWFDTGK VDAIMDVAVS APALAVLEVA KQKQKVVIFN GPGLDRLTGD LCMPSTVHYV YDTYALANVT ASAITARGGK DWFFITADYA FGHSLQEQAS AVVTAQGGKV LGAARHPIAA TDFASFLISA QNSKAQVVGL ANAGGDTVNT IKAAREFGLT TGKNKQTLAG LLMYINDIHA IGLRTAGGLM LTEGFYWDMN DETRAWSKRY FEKMKKMPNM SQAGAYSSTM HYLKAVQAAK TDDTAQVMAK MKATPINDFF AKNGRIREDG RMVHDMYLFE VKSQAESKYP WD
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