Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3845 |
Symbol | |
ID | 4673717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4081034 |
End bp | 4082314 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639840878 |
Product | GntR family transcriptional regulator |
Protein accession | YP_988028 |
Protein GI | 121596132 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG CGCTGCCCCA CCCGCAGGGC CGCACACCGC CGCACAACGG CATTTCTGAG TGGATAGACG GCGCGCAGCA GCGCGCCATT GGAGATAAAC GAATGACGAA CTGGACCCTG GCCGCACGCG CCGAAAAGAT GAACCCCTCG GTGATCCGGG AAATCCTGAA GGTGACCGAG AAGCCCGGCA TCATCAGCCT GGCCGGCGGG CTGCCCTCGC CCAAGACCTT CCCGATCGAA TCCTTCGCCG CCGCGGCCGC TTCCGTGCTG GCCACCGACG GCGCATCGGC GCTGCAGTAC GCGGCCAGTG AGGGCTATAC CCCGCTGCGC GAGGCCATTG CCGCATTCCT GCCCTGGGAC GTGCACCCCG ACCAGGTGCT GATCACCACC GGGTCGCAGC AGGCGCTGGA CCTGATCGGC AAGGTGCTCA TCGACGCGGG CAGCCACGTG CTGGTGGAAA CACCCACCTA CCTGGGCGCG CTGCAGGCCT TCGCGCCCAT GGAACCCCAG GTGGTGTCGG TGGCCAGCGA CAGCGAGGGC GTGCTGATCG ACGACCTGGC GGCCAAGGCC GGCAGCGGCG CGGACAAGGC GCGCTTCCTG TACGTGCTGC CCAACTTCCA GAACCCCACG GGCCGCACCA TGAGCGAAGC CCGCCGCGAG GCCCTGGTGG CCCAGGCCGC CGCGCTGAAC CTGCCGCTGG TGGAAGACAA CCCCTATGGC GACCTGTGGT TCGACCAGGC GCCCCCTAAA CCCCTGACGG CGCGCAACCC CGAGGGCTGC ATCTACATGG GTTCGTTCTC CAAGGTGCTG GCCCCCGGCC TGCGCCTGGG CTACGTCGTG GCGCCGCGCC AGATGTACCC CAAGCTGCTG CAGGCCAAGC AGGCGGCCGA CCTGCACACG CCCAGCTTCA ACCAGCGTCT GGTGTCCGAG GTCATCAAGA ACGGCTTCCT GGACCGCCAC GTGCCCACCA TCCGCCAGCT CTACAAGGAG CAGTGTCAGG CCATGGTGGC CGCGCTGGAG CAGGAGATGC AGGGCCTGGG CGTGACCTGG AACCGCCCCG ACGGCGGCAT GTTCCTGTGG CTGCGCCTGC CCGAAGGCAT GAGCGCGCTG CAACTGCTGC CGCGCGCGGT GGAGCGCAAC GTGGCCTTCG TGCCCGGCGC GGCCTTCTAC GCCGACCAGC CGGACGACCG CACGCTGCGG CTGTCCTTCG TGACGGCCTC GCAGGGCCAG ATCCGCACCG CGATTGCCGC GCTGGCCGCC GCCATCCGCG AAGCGGCCTG A
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Protein sequence | MLRALPHPQG RTPPHNGISE WIDGAQQRAI GDKRMTNWTL AARAEKMNPS VIREILKVTE KPGIISLAGG LPSPKTFPIE SFAAAAASVL ATDGASALQY AASEGYTPLR EAIAAFLPWD VHPDQVLITT GSQQALDLIG KVLIDAGSHV LVETPTYLGA LQAFAPMEPQ VVSVASDSEG VLIDDLAAKA GSGADKARFL YVLPNFQNPT GRTMSEARRE ALVAQAAALN LPLVEDNPYG DLWFDQAPPK PLTARNPEGC IYMGSFSKVL APGLRLGYVV APRQMYPKLL QAKQAADLHT PSFNQRLVSE VIKNGFLDRH VPTIRQLYKE QCQAMVAALE QEMQGLGVTW NRPDGGMFLW LRLPEGMSAL QLLPRAVERN VAFVPGAAFY ADQPDDRTLR LSFVTASQGQ IRTAIAALAA AIREAA
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