Gene Ajs_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3838 
Symbol 
ID4670684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4072008 
End bp4073270 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content69% 
IMG OID639840871 
Productflagellar hook-associated protein 3 
Protein accessionYP_988021 
Protein GI121596125 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCT CTTTCTACCG CGTCAGCACC GCCAACATGT ACGACGCCAC GCTGCGCAAC 
CTCAGCGCAC GGCAGAAAAC CCTGGTGGAC CTGCAGGAGA ACCTCACCGC GGGCAAGCGC
GTGGTGCGCC CCAGCGACGA CCCCGTGGCC GCCGCCCAGG CCGAGCGCGC GCTCACGCGC
ATCAGCCGCA TCCAGACCGA GCAGCGCGCG CTGGACGTGC AGCGCAACGC CATCGCGCAG
GCCGAGTCCA CCCTGGGCGA CGCCGTGGGC CTGGTGCAGG AGATTCGCCA GCTGGTCGTG
GCCGCTGGCG GCGGCGCGCT TAAGCCCGAG GACCGCAAGA CCTACGCCAA CCAGATCCAG
AGCCTGCGCG AGCAGCTCAC GCAGGTGATC AACCGCAAGG ACACCAACGG CGTTCCCCTG
CTGGGCGCGC TGGGCAGCGC GCTGGAGCCC TTCACCGGCC CGCTGCTGAA CAACCCCGAC
TACCTGTTCG CCGGACTGCC GGGGCAGGCA GCCAGCAGTG GCGCGGCGAT CCCCACCACC
GTGGACGGGC ATGCCGCGCT GATGTTCGAC CCGGTGCGCG ACGGCGTGTA CACCGCCACC
GTCACGCGCG GCGCGGGCAG TTCCCTGGTG ACGAGCGCCA TCACGACCTC CAACCGCGAG
GCACTGGACG GGGCGCAGTA TGCGCTGGCC GTCGACACCG TCACGGTGGA CCCGGTAGCG
GGCACCACCG TCGTCGACTA CACGCTGACC AAGACCGCCA AGGACGGCAC GGTGACCACC
TCGAACGTGA CCACCGCGCC CGTCAAGACC GGCCAGCCCA TTCCCATCAC CATCAACGAA
GGCCCGGACA CGGTCATGTC GTTCAGCCTG ACGGGCACGC CCGCGGCGGG CGACAGCGTT
GCCCTGCAGC CCAGCTCCAG CCTGATGGGC ACCATCGACA GCGCGATCCG CGGGATCACC
GACGCCACCG ACAGCGTGGC CGCGTCCCAG GCCGTCGGCC AGGCCCTGTC CAACATCGAC
GCCGGCATGG AACGCCTGCA CAACATGCGC GGCTATGCGG GCGAGCTGCT CAACCGCGCC
GACCGCATCA CCGGCGACCA GGACAAGCGC TCGATCCAGC TCGAAGCCGA CCGCTCGCGC
GCGGAGGACC TCGACATGGT GCAGGGTATC TCGGACTTCC AGAACGCCAG CGTGGGCTAC
GAGGCCGCGC TCAAGTCCTA CGCGCAGGTG CAGCGCCTGT CGCTCTTCAA TTTCATCAGC
TGA
 
Protein sequence
MSSSFYRVST ANMYDATLRN LSARQKTLVD LQENLTAGKR VVRPSDDPVA AAQAERALTR 
ISRIQTEQRA LDVQRNAIAQ AESTLGDAVG LVQEIRQLVV AAGGGALKPE DRKTYANQIQ
SLREQLTQVI NRKDTNGVPL LGALGSALEP FTGPLLNNPD YLFAGLPGQA ASSGAAIPTT
VDGHAALMFD PVRDGVYTAT VTRGAGSSLV TSAITTSNRE ALDGAQYALA VDTVTVDPVA
GTTVVDYTLT KTAKDGTVTT SNVTTAPVKT GQPIPITINE GPDTVMSFSL TGTPAAGDSV
ALQPSSSLMG TIDSAIRGIT DATDSVAASQ AVGQALSNID AGMERLHNMR GYAGELLNRA
DRITGDQDKR SIQLEADRSR AEDLDMVQGI SDFQNASVGY EAALKSYAQV QRLSLFNFIS