Gene Ajs_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3832 
Symbol 
ID4670734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4065062 
End bp4065844 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID639840865 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_988015 
Protein GI121596119 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.405725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.684402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATT CGCTGTGGAT CGCCAAGACC GGCATGACCG CCCAGCAGAC CCAGCTGGAC 
GTGATCTCGC ACAACCTCGC CAACGTGTCC ACCACGGGCT TCAAGCGCAA CAACGCGGTG
TTCGAGGACC TGATCTACCA AAACCTGCGC CAGGTCGGCA GCCAGACCAC CGAGGAGAAC
CAGTTGCCCA CGGGCCTGCA CCTGGGCCTG GGCGTGAACG TGGTCGCCAC CAGCCGCAAC
TTCACGCAGG GCAGCCTGCA GCAGTCGGGC AACAGCCTGG ACGTGGCCAT CGACGGCAAC
GGCTTCTTCG AGGTCCAGCT GCCCGACGGC ACCACCGGCT ACACGCGCGA CGGCGCGTTC
AAGCTCGACT CGCAGGGCCG CGTGGTCACC TCCAGCGGTC TGCCCGTGGC GCCCGGCATC
ACCGTGCCGG CGGACGCCAA GAGCATCAGC ATCAGCGAGC GCGGCATGGT GAGCGTGACC
GTGGCGGGCA ACCCCAACCC CCAGCAGATC GGCCAGCTGG GCATGTCCAG CTTTATCAAC
TCCGCAGGCC TGGAGCCTGT GGGCCAGAAC CTGTACCGCG AGTCCGCCGC CTCCGGCGCG
CCGCAGCAGG CCGAGCCGGG CACCAACGGC CTGGGCATCA TCAAGCAGGG CTTCCTGGAG
AACTCCAACG TCAACGTGGT GGAGGAACTG GTCACCATGA TCCAGACCCA GCGCGCCTAC
GAGATGAATT CCAAGGCTAT CCAGACGTCC GACCAGATGC TGGCCAAGCT GTCGCAGCTG
TGA
 
Protein sequence
MMNSLWIAKT GMTAQQTQLD VISHNLANVS TTGFKRNNAV FEDLIYQNLR QVGSQTTEEN 
QLPTGLHLGL GVNVVATSRN FTQGSLQQSG NSLDVAIDGN GFFEVQLPDG TTGYTRDGAF
KLDSQGRVVT SSGLPVAPGI TVPADAKSIS ISERGMVSVT VAGNPNPQQI GQLGMSSFIN
SAGLEPVGQN LYRESAASGA PQQAEPGTNG LGIIKQGFLE NSNVNVVEEL VTMIQTQRAY
EMNSKAIQTS DQMLAKLSQL