Gene Ajs_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3828 
Symbol 
ID4670751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4061555 
End bp4061959 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content66% 
IMG OID639840861 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_988011 
Protein GI121596115 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.368958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGT TCTCCATCTT CAACGTTTCG GGCAGCGCCA TCAGCGCGCA GTCGCAGCGG 
CTGAACGTCG TGGCCAGCAA CCTGGCCAAC GTGGACGCCG TGGCCGGCCC CGACGGCCAG
GCGTACAAGG CGCGCCAGGT GGTCTTCCAG ACCGCGCCCA TGGGACCCGA GAGCGCCGCG
GGCGTGCGCG TGTCGTCCAT CCAGGAGAGC GACCAGCCCG GCCGCCGCGT GCACGACCCG
GCCAACCCCA TGGCCGACGC CGAAGGCTAC GTGACCCACT CCAACGTGAA CGCCGTGGAG
GAGATGGTCA ACATGATCTC TGCATCGCGT TCCTACCAGA ACAACGTCGA GGTCATGAAC
ACGGCCAAGA CGCTGCTGCT CAAGACCCTG CAGATGGGCC AGTAA
 
Protein sequence
MSMFSIFNVS GSAISAQSQR LNVVASNLAN VDAVAGPDGQ AYKARQVVFQ TAPMGPESAA 
GVRVSSIQES DQPGRRVHDP ANPMADAEGY VTHSNVNAVE EMVNMISASR SYQNNVEVMN
TAKTLLLKTL QMGQ