Gene Ajs_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3814 
Symbol 
ID4670529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4048345 
End bp4049181 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID639840847 
Productflagellin domain-containing protein 
Protein accessionYP_987997 
Protein GI121596101 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA TCAACACCAA CATCGCATCG CTGAATGCGC AGCGCAACCT CAATACATCG 
CAAGCTTCGC TGGCCACCTC GATGCAGCGC CTGTCTTCGG GCCTGCGCGT CAACAGCGCC
AAGGACGACT CGGCTGGCCT GGCGATCGCC GAGCGCATGA GCGCACAAGT GCGCGGCATG
AACGTGGCGA TCCGCAACGC CAATGACGGC GTTTCGCTGT CGCAGACGGC GGAAGGCGCC
CTGGGCAAGG TGGGTGATTC GCTGCAGCGC ATGCGTGAAC TGGCAGTGCA GGCGCGCAAC
TCCACGAACT CTAATGACGA CAAGGATTCG CTCGATAAGG AGTACCAGGC GCTGGCTTCT
GAAATCACGC GCGTGCTGGG CGGCACCACA TTCAATGGCA AGCACATTTT GGGCGCTGAC
GCTGGGACGC TGACCTTCCA GATCGGTGCC AATACGACAG CCGACGACTC GATCGATGTG
GTCACCACGG ACATGACGGG CGACGCAACC ATTACCGCTG TCACGGGTGG AAAAATCGAC
AACACCGCTA CCACGGCGAC GCTCAAGACC GTTATTGACA ACATCGACAC TGCGCTGAAG
ACCGTCAACT CGAAGCGTGC CGATTTCGGC GCGGCGCAAA ACCGGTTCGA TGCGGTGATC
TCCAACCTGC AGGTGTCTGT CGAGAACCAG TCGGCCGCCC GCAGCCGCAT CATGGATGCC
GACTTCGCAT CGGAAACGGC CAATCTCTCG CGCTCGCAGA TCCTGCAGCA GGCCGGCACC
GCCATGGTGG CCCAGGCCAA CCAGTTGCCA CAAGGCGTCC TGTCACTGCT GCGCTAA
 
Protein sequence
MAVINTNIAS LNAQRNLNTS QASLATSMQR LSSGLRVNSA KDDSAGLAIA ERMSAQVRGM 
NVAIRNANDG VSLSQTAEGA LGKVGDSLQR MRELAVQARN STNSNDDKDS LDKEYQALAS
EITRVLGGTT FNGKHILGAD AGTLTFQIGA NTTADDSIDV VTTDMTGDAT ITAVTGGKID
NTATTATLKT VIDNIDTALK TVNSKRADFG AAQNRFDAVI SNLQVSVENQ SAARSRIMDA
DFASETANLS RSQILQQAGT AMVAQANQLP QGVLSLLR