Gene Ajs_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3812 
Symbol 
ID4670872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4046143 
End bp4046982 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID639840845 
Productflagellin domain-containing protein 
Protein accessionYP_987995 
Protein GI121596099 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAA CCATCAACAC CAATATTTCT TCGCTGAATG CGCAGCGCAA CCTCAATACC 
TCGCAGGCTT CGCTGTCCAC CTCCATGCAG CGCCTTTCGT CGGGTCTGCG CGTCAACAGC
GCCAAGGACG ATGCGGCTGG CCTGGCGATC GCCGAACGCA TGAACACGCA GGTGCGCGGC
ATGAACGTGG CGATCCGCAA CGCCAATGAC GGCGTTTCGC TGGCGCAGAC GGCGGAAGGC
GCCCTGGGCA AGGTGGGTGA TTCGCTGCAG CGCATGCGTG AACTGGCAGT GCAGGCGCGC
AACTCCACGA ACTCTAATGA CGACAAGGAT TCGCTCGATA AGGAGTACCA GGCGCTGGCT
TCTGAAATCA CGCGCGTGCT GGGCGGCACC ACATTCAATG GCAAGCACAT TTTGGGCGCT
GACGCTGGGA CGCTGACCTT CCAGATCGGC GCCAATACCA CTGCCGACGA CACTATCGAT
GTGGTCACCA CGAACATGAA GGTTGACACA ACCATTACCG CTGTCACGGG TGGAACAATT
GACAACACCG CTGACACGGC GGCGCTCAAG GCCGTTATTG ACAACATCGA CACAGCGCTG
GACACCGTCA ACTCGAAGCG TGCCGATTTC GGCGCGGCGC AAAACCGGTT CGATGCGGTG
ATCTCCAACC TGCAGGTGTC TGTCGAGAAC CAGTCGGCCG CCCGCAGCCG CATCATGGAT
GCCGACTTCG CGGCCGAAAC GGCCAACCTG TCGCGCGCCC AGATTCTGCA GCAGGCCGGT
ACCGCCATGG TTGCGCAGGC GAACCAGTTG CCCCAGACGG TGTTGAAACT GCTCCAGTAA
 
Protein sequence
MASTINTNIS SLNAQRNLNT SQASLSTSMQ RLSSGLRVNS AKDDAAGLAI AERMNTQVRG 
MNVAIRNAND GVSLAQTAEG ALGKVGDSLQ RMRELAVQAR NSTNSNDDKD SLDKEYQALA
SEITRVLGGT TFNGKHILGA DAGTLTFQIG ANTTADDTID VVTTNMKVDT TITAVTGGTI
DNTADTAALK AVIDNIDTAL DTVNSKRADF GAAQNRFDAV ISNLQVSVEN QSAARSRIMD
ADFAAETANL SRAQILQQAG TAMVAQANQL PQTVLKLLQ