Gene Ajs_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3808 
Symbol 
ID4670533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4043147 
End bp4043458 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content65% 
IMG OID639840841 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_987991 
Protein GI121596095 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC GCATCAACAG CACCCAGTTT CCCCTCACCG GCACCCAGGT GGCGCGCCGC 
GTCACCGCGC CGCAGGAAGG CGTGCAGGAG GCCGGCTTTT CCTCGGCGTT CAGGAACGCG
CTGCAGTCCG TGAGCGCCGC GCAGGACCAG GCCAGCGGCC TGCAGCGCGA AGTGCAACTG
GAAAACCCCA ACGTCAGCAT CGAGGAAACC ATGGTCGCCA TGCAGAAGGC GCAGATCGGC
TTCCAGGCCA CGCTGCATGT GCGCAACCGC ATGGTGCAGG CCTACACCGA CATCATGAAC
ATGCAGGTGT AA
 
Protein sequence
MDLRINSTQF PLTGTQVARR VTAPQEGVQE AGFSSAFRNA LQSVSAAQDQ ASGLQREVQL 
ENPNVSIEET MVAMQKAQIG FQATLHVRNR MVQAYTDIMN MQV