Gene Ajs_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3799 
Symbol 
ID4670953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4034060 
End bp4034509 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID639840832 
Productflagellar motor switch protein FliN 
Protein accessionYP_987982 
Protein GI121596086 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTG AATCCGACCA CAACGACAAC TCTGGCGGGT CCGCTGCGGA CGACCCGTTT 
GCCGGCTGGG CCGAGGCACT GGAAGAGCAA AAGCGCGTCG ACGGGCAGAC CATCGATGCC
GAGCAGGGAG GCCCGTTGTC GGGCGAGCCC GCGCGCCCCT ATGCCGCCGG CGGCGAGCCG
CAGGTGCACG ACATCAACAT GGTGCTGGAC ATTCCGGTGC AGCTGTCGGT GGAACTGGGC
CGCACCAAGG TGCCGATCAA ATACATCCTG CAGCTGGCCC AGGGCTCGGT GGTGGAGCTG
GACGCGCTGG CCGGCGAGCC CATGGACGTG CTGGTCAACG GCTACCTCAT CGCCCAGGGT
GAAGTGGTGG TGGTGAACGA CAAGTTCGGT ATCCGCCTGA CCGACGTGGT CACGCCTTCG
GAACGGCTGC GCCGCGTCAG CCGTGGATAG
 
Protein sequence
MSTESDHNDN SGGSAADDPF AGWAEALEEQ KRVDGQTIDA EQGGPLSGEP ARPYAAGGEP 
QVHDINMVLD IPVQLSVELG RTKVPIKYIL QLAQGSVVEL DALAGEPMDV LVNGYLIAQG
EVVVVNDKFG IRLTDVVTPS ERLRRVSRG