Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3799 |
Symbol | |
ID | 4670953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4034060 |
End bp | 4034509 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840832 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_987982 |
Protein GI | 121596086 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAACTG AATCCGACCA CAACGACAAC TCTGGCGGGT CCGCTGCGGA CGACCCGTTT GCCGGCTGGG CCGAGGCACT GGAAGAGCAA AAGCGCGTCG ACGGGCAGAC CATCGATGCC GAGCAGGGAG GCCCGTTGTC GGGCGAGCCC GCGCGCCCCT ATGCCGCCGG CGGCGAGCCG CAGGTGCACG ACATCAACAT GGTGCTGGAC ATTCCGGTGC AGCTGTCGGT GGAACTGGGC CGCACCAAGG TGCCGATCAA ATACATCCTG CAGCTGGCCC AGGGCTCGGT GGTGGAGCTG GACGCGCTGG CCGGCGAGCC CATGGACGTG CTGGTCAACG GCTACCTCAT CGCCCAGGGT GAAGTGGTGG TGGTGAACGA CAAGTTCGGT ATCCGCCTGA CCGACGTGGT CACGCCTTCG GAACGGCTGC GCCGCGTCAG CCGTGGATAG
|
Protein sequence | MSTESDHNDN SGGSAADDPF AGWAEALEEQ KRVDGQTIDA EQGGPLSGEP ARPYAAGGEP QVHDINMVLD IPVQLSVELG RTKVPIKYIL QLAQGSVVEL DALAGEPMDV LVNGYLIAQG EVVVVNDKFG IRLTDVVTPS ERLRRVSRG
|
| |