Gene Ajs_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3790 
Symbol 
ID4671034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4026829 
End bp4028961 
Gene Length2133 bp 
Protein Length710 aa 
Translation table11 
GC content67% 
IMG OID639840823 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_987973 
Protein GI121596077 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA CCTACCAAGA GGGCGCAGGC GCGGACTTTG ACCTCAGCCA GTTCTATCAG 
ATCTTCTTCG AAGAGGCCGG CGAGAACCTG GACCAGATGG AGCAGATGCT GCTGGACCTG
GACGTGGATG CCGCCAACGA CGAAGAGCTG AACGGCATCT TCCGCTGCGC GCATTCCATC
AAGGGCGGCT CGGCCACCTT CGGTTTTTCG GATGTGGCGG AACTCACACA CCAAATGGAA
TCGCTGCTGG ACCGGCTGCG CCGCCACGAA CTGCAGCTGA TCCCGCAGAT GGTGGACGTG
CTGCTGGAGT CGGCGGACGC CTCGCGCAGC CTGCTGGCAC GCCATCAGGC GGGCGGGCAG
GGTGAGGCGG TTTCCACGCA TGACCTCGTG CGCCGCATCA GCGAACTGGC GGCCGGCGCC
GTGCCAGCGG CAGCGCCCGC CGCAGCGGCG CCCGCTCCAG CGCCTGTGGT TGCTGCGGCA
CCTGCGCCAA CGCCCGCGGT TGCGCAGGTG GTGCCCGCTG CGGCGGTCCC CGGCGGCGCT
CGCTCGCTGG AGATCCACAT CGGTCCACTG GCCCAGGCGA CATTGGCCGA TGCGATCAAG
GACCTGTTCC GCGACATCCC GGGCTTGGGC AGCATCAACG ATCTGCCGGA AGACCGCCCC
GGCATGCGCC GGTTCGCGGT GCACACCACG TCCACGGACG AGGATCTGCT GGACCTGTTC
GCATTCCATG TGGCGAAGGA GCAGGTGGCC ATCCACGACG CGGCGGCTTC CGCGGCACCT
GCCGCGCAAG AGGCCCATGA GCCGCTGGAG CCATCCGCTG CGGCCCTGGC CGAGCCGTAC
GGCTTCTTTG CCGGCGCGCC GGGCGTGCCT GTCGAGGCCG CTGCTGCCGC CGCACCGGCC
AGTGCTGCTG AGCGGCCCGC CGCGCGTGCC GCCTCCGCCG AGGCCAAGGG CGGCGCGCAG
GCCTCCATGG AATCGTCCGC CATTCGCGTG GCGGTGAGCA AGGTGGATCA GCTCATCAAC
CTGGTGGGCG AACTGGTCAT CACCCAGGCC ATGCTGGCGC AGAACAGCCG TGGCCTGGAC
GCCGGCGTCT ACCAGCAACT GCTGGCAGGC CTGGCCGACC TGGACCGCAA CACGCGCGAC
CTGCAGGAAT CCGTGATGTC GATCCGTATG ATTCCCATGT CGATCGTGTT CAACCGCTTC
CCGCGCATGC TGCGTGACTT GGCGGGCAAG CTGGGCAAGA AGGTGGATTT CGTCACCCAC
GGCGAGGCGA CCGAACTGGA CAAGAGCCTG GTCGAGAAGA TCACCGACCC GCTGACCCAC
CTGGTGCGCA ACAGCTGCGA CCACGGCATC GAGATGCCCG CCGACCGCCT GGCTGCGGGC
AAGCCAGAAC ACGGCACCAT CACGCTGTCG GCAGCGCACC AGGGGGGCTC CATCGTGATC
GAGGTGCGCG ACGACGGCAA GGGCATGTCG CGCGAGAAGA TCCTCAAGAA GGCGCGCGAG
CGTGGGCTGG ATGTTTCCGA CGCCATGCCC GACAGCGAGG TCTGGAACCT GATCTTCGCG
CCCGGGTTCT CCACGGCGGA TGTGGTGACC GATGTCTCGG GCCGCGGCGT GGGCATGGAC
GTGGTCAAGC GCAACATCAC CGCGCTGGGT GGTTCGGTGG AGATTGATTC CGCTGAAGGC
TACGGCATGC GTGTGTCCGT GCGCCTGCCG CTGACGCTGG CCATCGTGGA CGGCATGTCG
GTGGGCGTGA GCGACGAGGT GTACATCCTG CCGCTGTCGT CGGTGGTGGA GTCGTTCCAG
GTCAACGGTG GCGAAGTGAA CACCGTAGCC CAGGGCTCCC AACTGGTGAA GGTGCGCGAC
GAATACATGC CCGTGGTGGC GCTGGAGAAG ATCTTCCAGG TGCCGCGTCC CGACGCGAAT
TCGACCAGCA GCATCATGGT GGTGGTGGAG GCCGATGGCA GCCGCGTGGC GGTGCTGGTC
GACGAACTGC TGGGGCAGCA CCAGGTGGTG GTGAAGAACC TGGAGACCAA CTACCGCAAG
GTGCCCAACG TGTCGGGCGC CACCATTCTG GGGGATGGCA CCGTGGCCTT GATTCTGGAC
ACGGCTGCCC TGGTGCGCCG TGCGCGCCAC TGA
 
Protein sequence
MADTYQEGAG ADFDLSQFYQ IFFEEAGENL DQMEQMLLDL DVDAANDEEL NGIFRCAHSI 
KGGSATFGFS DVAELTHQME SLLDRLRRHE LQLIPQMVDV LLESADASRS LLARHQAGGQ
GEAVSTHDLV RRISELAAGA VPAAAPAAAA PAPAPVVAAA PAPTPAVAQV VPAAAVPGGA
RSLEIHIGPL AQATLADAIK DLFRDIPGLG SINDLPEDRP GMRRFAVHTT STDEDLLDLF
AFHVAKEQVA IHDAAASAAP AAQEAHEPLE PSAAALAEPY GFFAGAPGVP VEAAAAAAPA
SAAERPAARA ASAEAKGGAQ ASMESSAIRV AVSKVDQLIN LVGELVITQA MLAQNSRGLD
AGVYQQLLAG LADLDRNTRD LQESVMSIRM IPMSIVFNRF PRMLRDLAGK LGKKVDFVTH
GEATELDKSL VEKITDPLTH LVRNSCDHGI EMPADRLAAG KPEHGTITLS AAHQGGSIVI
EVRDDGKGMS REKILKKARE RGLDVSDAMP DSEVWNLIFA PGFSTADVVT DVSGRGVGMD
VVKRNITALG GSVEIDSAEG YGMRVSVRLP LTLAIVDGMS VGVSDEVYIL PLSSVVESFQ
VNGGEVNTVA QGSQLVKVRD EYMPVVALEK IFQVPRPDAN STSSIMVVVE ADGSRVAVLV
DELLGQHQVV VKNLETNYRK VPNVSGATIL GDGTVALILD TAALVRRARH