Gene Ajs_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3789 
Symbol 
ID4671039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4026307 
End bp4026795 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID639840822 
ProductCheW protein 
Protein accessionYP_987972 
Protein GI121596076 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.763569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGG TGGACAAGGG CGCAGAGACC ACGGCTGCGG GCGCGAGGGA ATACCTGACG 
TTCCGCCTGG GCCAGGAGGA ATACGGCATC GACATCCTCA AGGTGCAGGA AATCCGCGGC
TATGAAAACC CCACGCGCAT CGCCCATGCG CCGGCTTTCA TCAAAGGGGT GACCAACCTG
CGAGGCACCA TCGTGCCGAT CGTGGACATG CGGCTGCGCT TCAACTGTGC GCAGGCCGAG
TACAACAGCT TCACGGTCGT CATCATCCTG AACCTGCGCG AGCGGGTGGT GGGCATCGTG
GTGGATTCCG TGAGCGACGT GATGGAGCTG ACGCCCGAAC AGGTACGCAC GGCCCCGGAC
ATCGAGAGCT CCATCGACGC GCAGTGCATC CGCGGGCTTG GCTCGGTGGG CGACCGCATG
CTCATCCTGC TGGACATCGA AAAACTCATG GCCGGCATGG ACATGGGCCT TGCCATGGCC
GGGGATTGA
 
Protein sequence
MSLVDKGAET TAAGAREYLT FRLGQEEYGI DILKVQEIRG YENPTRIAHA PAFIKGVTNL 
RGTIVPIVDM RLRFNCAQAE YNSFTVVIIL NLRERVVGIV VDSVSDVMEL TPEQVRTAPD
IESSIDAQCI RGLGSVGDRM LILLDIEKLM AGMDMGLAMA GD