| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3787 |
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| Symbol | |
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| ID | 4671519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4024588 |
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| End bp | 4025325 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639840820 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_987970 |
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| Protein GI | 121596074 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.54993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCC CACCCGGAGC TGATCCACGG CCCTCTGCCT TGCCGGGCGG GGGGCTGGAG
CGCCGGCGCA CGCCCCGCAT CACGCCTCTG CCTGCGAATG CCTCCGCAGG CACCGCGCCT
GCCATGTCGC TCCAGGAGCT CAAGGCCTGT CCGCGCAGGC CGGGTGAGGC ATCGTTTTTC
TTTTTCGATC ACCATTTCCA GCACAACGCG GTGAAGGTCT TGCCAGGCGA GTTTTTTGTC
TCGCACGACA GCCTGGCCAT CATGACGGTG CTGGGATCGT GCATTGCCGC CTGTCTGTGG
GACAGCCGCA TGCGCGTGGG AGGCATGAAC CACTTCATGC TGCCCGAGGG GGACAGCGCC
GATGCGTCGG GCCGGTATGG TTCCTACGCC ATGGAACTGC TCATCAATGA GATGATGAAG
CTGGGCGCTC GCCGCGAGAC GCTGCAGGCC AAGATCTTCG GCGGTGCCCA GGTGATGCAC
AACTTCACCA CGCTCAACGT GGGCGAGCGC AACACCCGCT TTGTGCAAGA CTATCTGGCT
ACGGAGCGCA TTCCGGTGGT GTCGGAGGAC GTGCTCGACA TCTATCCGCG CAAAGTGGTG
TTCTTTCCGG TGACGGGCAA GGTGATGGTC AAGCGCCTGG CGCATGCCCA TCCCGAAACG
CTGGAGCAGG AAGTGGTGCG CGGCAACGCA GCTACCGTGG CGCGCGCCAC CAGCGGAGGC
TCCGTGGATC TGTTCTGA
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| Protein sequence | MSIPPGADPR PSALPGGGLE RRRTPRITPL PANASAGTAP AMSLQELKAC PRRPGEASFF
FFDHHFQHNA VKVLPGEFFV SHDSLAIMTV LGSCIAACLW DSRMRVGGMN HFMLPEGDSA
DASGRYGSYA MELLINEMMK LGARRETLQA KIFGGAQVMH NFTTLNVGER NTRFVQDYLA
TERIPVVSED VLDIYPRKVV FFPVTGKVMV KRLAHAHPET LEQEVVRGNA ATVARATSGG
SVDLF
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