Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3785 |
Symbol | |
ID | 4671552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4021542 |
End bp | 4023428 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639840818 |
Product | ABC transporter related |
Protein accession | YP_987968 |
Protein GI | 121596072 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.485733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGA TTACTCTGAT GAACGCCCAG CTGGCGTTCG GGCATGTAGC GCTGTTGGAC CATGCCACGT TCGCGCTGGA ATCCGATGAG CGCGTGGGAC TGATTGGGCG CAATGGTGCA GGGAAGTCGT CACTTCTGAA AATTCTGGGC GGCTTGGCCC ATGCAGATGA CGGCACCCTG AGTGTCCAGC AGGGCCTGCG CATTACCTAT GTGGCCCAAG AGCCTGATCT ACAGCCTGAG GACACCGTCT TCCAATCCGC CGCCCGCGGG TTGGGCGAAG CGATCGCGCT GCGGGAACAA TACCTGGGGG GCGCCACAGG CCTTGATTTG GATGCATTGC AGTCTCAGAT CGAGGCTTAT GACGCCTGGA ACTGGGAGCA ACGGGTAGAG GAAACTTTGC ACCGCTTGCA CCTTGCCCCG GAGGCCATCG TGGGCACCCT CTCGGGAGGG ACACGCAAGC GAGTCGCGCT GGCGCAAGCG CTGGTGGCTC GCCCGGACGT GCTGCTGCTG GACGAGCCCA CCAACCACCT AGACCTCGAT TCCATAGAGT GGCTTGAAGA ACTGCTACTC GACTTCAAGG GTGGCATCGT CACGATCACC CACGACCGTG CGTTCCTCGA CCGGATCGCC ACGCGCATCG TGGAGCTCGA CCGAGGTCAG TTGCGCTCCT ATCCCGGCAA CTTTGCGCAG TACGTGGCGC AAAAGGAAGA GCAGTTGGCG CAAGAGGCCG TCATTAATGC ACGGGCGGAC AAGCTGCTGG CGCAGGAGGA GGTCTGGATC CGCAAGGGCG TGGAGGCGCG CCGAACGCGC AGCCAGAGCC GCATCAGTCG ACTGGAGACC CTGCGCGCCA ATCGCGCCGC GCGCCGTGAC GCGGTTGGCA GCGTCAAGAT GGACATCGCC TCGGGCAGCC AGAACAGCTA CCAGGGGAAG ATCATCGCCG AGCTGGCGCA CGTAACCAAA ACCTTTGGCG ACAAAACCAT CGTGCGGGAT TTCAGCGCCA CCATCCTGCG GGGCGACAAG GTGGGTTTGA TCGGTCCCAA CGGTGCGGGG AAAACCACCC TGCTCAAGCT CATCCTGGGT GAACTGGAGC CTGACAGCGG TACGGTACGC CGCGGCGCCA ACCTGCAGGT CGCGTATTTC GACCAGATGC GCCACAGTAT CGACATGGAT GCCACGCTGG AGGACTTCAT CAGTCCTGGC AGCGAGTGGA TCGAGATCGG CACGCAGCGC AAGCATGTGA AGAGCTACCT CGGCGATTTC CTGTTCTCCC CCGCCCGGGC GCACTCCCCC GTGCGCTCGC TGTCCGGCGG CGAGCGCAAC CGCCTCCTGC TGGCACGGCT GTTTGCGCGG CCCGCCAACG TGCTGGTGCT GGACGAGCCC ACCAACGACC TGGACATTGA CACCCTCGAG CTGCTGGAGG AGCTGCTGCA GGATTACGAC GGCACGGTGT TCGTAGTGAG CCACGACCGC ACCTTCCTGG ACAACGTGGT CACCAGCACC CTTGCGTTCG AGGGGAATGG CCTGTGGCGG GAGTATGAGG GCGGCGTGCA GGACTGGCTG GCCCAGTCGA ACCGCAGCCG TTCACTCGCG GGCGGACCGG CGGTTCCTGA GAAAAATACG AGCAAAAACG AGCCAAAACG CCCGTCAGAT AAGCGCGAGC AGCTACAAAA AAAGAAGCTA AGCTACAAGG AGCAGCGCGA ACTGGAACAG CTACCCGCCC AGATCGACGC ACTGGAGGCC GAGCAAAAGG CGATCCGCGA TGAATTGGCG GACGGCAGCC TGTACAGCCG AGACGGCGCG CGGGCGACGG CGCTGCATAC GCGTGACGGA GAGATCGAAG ATCTGTTGAT GCAGGCGCTG GAGCGCTGGT CCGCGCTCTC GTCCTGA
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Protein sequence | MALITLMNAQ LAFGHVALLD HATFALESDE RVGLIGRNGA GKSSLLKILG GLAHADDGTL SVQQGLRITY VAQEPDLQPE DTVFQSAARG LGEAIALREQ YLGGATGLDL DALQSQIEAY DAWNWEQRVE ETLHRLHLAP EAIVGTLSGG TRKRVALAQA LVARPDVLLL DEPTNHLDLD SIEWLEELLL DFKGGIVTIT HDRAFLDRIA TRIVELDRGQ LRSYPGNFAQ YVAQKEEQLA QEAVINARAD KLLAQEEVWI RKGVEARRTR SQSRISRLET LRANRAARRD AVGSVKMDIA SGSQNSYQGK IIAELAHVTK TFGDKTIVRD FSATILRGDK VGLIGPNGAG KTTLLKLILG ELEPDSGTVR RGANLQVAYF DQMRHSIDMD ATLEDFISPG SEWIEIGTQR KHVKSYLGDF LFSPARAHSP VRSLSGGERN RLLLARLFAR PANVLVLDEP TNDLDIDTLE LLEELLQDYD GTVFVVSHDR TFLDNVVTST LAFEGNGLWR EYEGGVQDWL AQSNRSRSLA GGPAVPEKNT SKNEPKRPSD KREQLQKKKL SYKEQRELEQ LPAQIDALEA EQKAIRDELA DGSLYSRDGA RATALHTRDG EIEDLLMQAL ERWSALSS
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