Gene Ajs_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3769 
Symbol 
ID4671758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3999232 
End bp4000938 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content70% 
IMG OID639840799 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_987954 
Protein GI121596058 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.43817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACCCCA GGCTTGCGCC CACCGGCCTA CACTGCGTTG CATCCTGCCC TGACAGCCGC 
TACAGCGCCA TGATCACCAT CACCCCGACC ACCACCATCG GCGACGCCTT CGAGCGCGCC
GCCGCAGCCT ACGGGCCCAA CAGCCTGCTG GCCGTGCCCG CCAACCCGGC GCGCAGCTAC
GACCCGCAAG GCCGCGAGAT CCGCTATGAC GAGGCCGCCA GCGCCGTGCG CGCACTCATG
CAGCACTACC GCGCCGCCGG CTATGGTCTG GGCCACCGCG TGGGCCTGTT TCTGGAAAGC
CGGCCCGAGC ACCTGCTGCA CAAACTGGCG CTGAACACCC TGGGTGTGTG CGTGGTGCCC
ATCAACCGCG ACTACCGCCC GCGCGAGCTG GCCTATCTGA TCGACCATGC GCGCGTGGAC
CTGGTGGTGG CCCTGCCCAC GCGCCTGCCC GCCGTGCGCG CCGCGCTGGC CGAGGCGCGC
CACCAGCCGC CAGTGGCCAC ACCCGATGAC ATGGCTGCGC TGCCGCCACC GGCACAGCCC
GCACAGGCTG GCGCGCCGCA GGCCGACACG CCCGCCAGCA TCCTTTACAC CTCGGGCACC
ACCGGGCAGC CCAAGGGTTG CGTGCTGTCG CACCGCTACG AACTGGCGGC CGGCGACTGG
TATGCGCGCC GGGGTGGCAT GGTGGCCATC CGCGAAGGCC AGGAGCGGCT GTACAACCCG
CTGCCGCTGT TCCATGTGAA CGCGTCCATC CTGTCGTTCT ATTGCATGCT GCTGACCGGC
GGCTGCCAGG TGCAGACCGA CCGCTTTGCA CCGTCGCGCT GGTGGCAGGA GGTGTGCGAG
AGCCGGGCCA CCATCGTGCA TTACCTGGGC GTGGTGGTGC CCATGCTGCT GGCCCAGCCT
GCCAGTCCGC TGGAGCGCGC GCACAGCGTG CGCTTTGGCT ACGGCGCCGG TGTCGAGCCG
CAGTTGCACA CCGTATTCGA AGAGCGCTTT GGCCTGCCCT TGGTGGAGCT GTGGGGCATG
ACCGAGATCG TGCGCGTCAT CTCCGACCAC CACGCGCCGC GCCAGATCGG CACGCGCGCC
TTTGGCCGCG CCGAGCCCGG CCTGGAGGTG TGCGTGGTGG ACGAAGCGGG CACCGAGGTG
GCCGACGGCC AGCCCGGCGA GATGTGGGTG CGCCATTCGG CGGCCACGCC GCGCAAGGAC
TTTTTCAGCG GTTACCTGAA CGACCCGGAG GCCACCGAGG CCGCCTGGCG CGGCGGCTGG
TTTCACACCG GCGACATCGT CACGCGCGAT GCCAGCGGCA TGCTGCGCTT CATGGACCGG
CGCAAGAACA TTATCCGCCG CTCGGGCGAG AACATTGCCG CCGCCGAGGT CGAGGCGCTC
CTGCTCACCC ACCCGCTGGT GCACCAGGCG GCCGTGATGG CTGTGCCCGA CGCGGTGCGC
GAAGAGGAAG TGCTGGCCTG CGTGGTGCTC GACCCCGCTG CCGCAGCGGG CATGGCACAC
GCCGACGCGG CGCACACCCT GCAGGCGTTC TGCCTGCGCG AGCTGGCTTA CTACAAGGCG
CCGGGCTGGT GGTGGTTTGC CGACGAGATC CCGACCACCG GCACGCAGAA GATCCAGAAG
CACCGCATCT TCCCGGCGGG CAGCGACCCG CGGGCGCTGG CGGGCATGGT GGATTTGTGC
GCGCTCAAGA AGCGGCAGGC GGGGTGA
 
Protein sequence
MHPRLAPTGL HCVASCPDSR YSAMITITPT TTIGDAFERA AAAYGPNSLL AVPANPARSY 
DPQGREIRYD EAASAVRALM QHYRAAGYGL GHRVGLFLES RPEHLLHKLA LNTLGVCVVP
INRDYRPREL AYLIDHARVD LVVALPTRLP AVRAALAEAR HQPPVATPDD MAALPPPAQP
AQAGAPQADT PASILYTSGT TGQPKGCVLS HRYELAAGDW YARRGGMVAI REGQERLYNP
LPLFHVNASI LSFYCMLLTG GCQVQTDRFA PSRWWQEVCE SRATIVHYLG VVVPMLLAQP
ASPLERAHSV RFGYGAGVEP QLHTVFEERF GLPLVELWGM TEIVRVISDH HAPRQIGTRA
FGRAEPGLEV CVVDEAGTEV ADGQPGEMWV RHSAATPRKD FFSGYLNDPE ATEAAWRGGW
FHTGDIVTRD ASGMLRFMDR RKNIIRRSGE NIAAAEVEAL LLTHPLVHQA AVMAVPDAVR
EEEVLACVVL DPAAAAGMAH ADAAHTLQAF CLRELAYYKA PGWWWFADEI PTTGTQKIQK
HRIFPAGSDP RALAGMVDLC ALKKRQAG