Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3765 |
Symbol | |
ID | 4672054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3994429 |
End bp | 3995514 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639840795 |
Product | AraC family transcriptional regulator |
Protein accession | YP_987950 |
Protein GI | 121596054 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACC GCCCTGACCC CGCGCCGCCA CCGCCCGCAC CCACCGCACT CCTCGCTACA CCCACGGCCG CCACGCCGAT GGCGTTTGTG CAGGCCATCG TGCAGGCCTA CGCAGCGCGC GGAATGGACG CGGCGCAGGT GCTGGCGCTG GCACAAATCC CGCCAGAGCA GGTTGGCAAC TCTGCGGGCC GCATCACGGC GCAGCAGATG GAGATGCTGT CCGCCGCTGC GATGCGCGAG CTGGACGACG AAGCCCTGGG CTGGTTCAGC CGCCGCCTGC CCTGGGGCAG TTACGGCATG CTGGCGCGCG CCAGCATCAG CTCACCCACG CTGCAAGTGG CACTGGCCCG CTGGTGCCGC CACCACGGCC TGCTGGCGGA CGACATTGCG CTGCATCTCA CCACCACCGG CGACACTGCC ACCCTGGCCA TCACCGAGGC GCGCGACCTG GGCGCGCTGC GCGAGTTCTG CCTGGTATCG GTGCTGCGCA ATGCCCACGG CCTGGCCTGC TGGATGGTGG ACTCGCGTAT CCCCCTCATC GCCGCCGAAT TTGCGTTTGA CGCGCCGCTG CATGCCGATG CGTATGCCGT GCTGTTCCGT GGCCCTGTCA CCTTCCACGC GCCGCGCACC GCCATCCACT TTGACGCCCG ATACCTGCAC CTGCCTCTGC GCCGCGACGA GCAGGCCCTG CGCCAGATGC TGCAGCACGC CCTGCCCCTG ACGGTGCTGC ACTACCGCCG CGACCGCCTG CTGGTGCAGC GCGTGCGCCA GCTGCTGGCC GCGCCCCTGC CGGGGCAACC GGCCCACGCC CTGCCCCAGC ACAGCGCCGA ATCCCTGGCC GCACTGCTGC ATGTGTCGCC ACGCACCCTG CACCGGCAAT TGAAGGAAGA AGGCGCCACG CTGCAGGGCC TGAAGGACGA GGTGCGCCGC ACCCGCGCGG TGGAGCTGCT GCACCGCACG CAGCGCCCCA TCAAGCAGGT GGCCGAGGCG GCCGGGTTTG AGAACGAGAA GAGTTTTATC CGGGCGTTTC GGGGGTGGAC GGGGCAGTCG CCGGCGGAGT TTAGAAAGGG GGGGGTGAGA GTCTAG
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Protein sequence | MPDRPDPAPP PPAPTALLAT PTAATPMAFV QAIVQAYAAR GMDAAQVLAL AQIPPEQVGN SAGRITAQQM EMLSAAAMRE LDDEALGWFS RRLPWGSYGM LARASISSPT LQVALARWCR HHGLLADDIA LHLTTTGDTA TLAITEARDL GALREFCLVS VLRNAHGLAC WMVDSRIPLI AAEFAFDAPL HADAYAVLFR GPVTFHAPRT AIHFDARYLH LPLRRDEQAL RQMLQHALPL TVLHYRRDRL LVQRVRQLLA APLPGQPAHA LPQHSAESLA ALLHVSPRTL HRQLKEEGAT LQGLKDEVRR TRAVELLHRT QRPIKQVAEA AGFENEKSFI RAFRGWTGQS PAEFRKGGVR V
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