Gene Ajs_3765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3765 
Symbol 
ID4672054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3994429 
End bp3995514 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content70% 
IMG OID639840795 
ProductAraC family transcriptional regulator 
Protein accessionYP_987950 
Protein GI121596054 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC GCCCTGACCC CGCGCCGCCA CCGCCCGCAC CCACCGCACT CCTCGCTACA 
CCCACGGCCG CCACGCCGAT GGCGTTTGTG CAGGCCATCG TGCAGGCCTA CGCAGCGCGC
GGAATGGACG CGGCGCAGGT GCTGGCGCTG GCACAAATCC CGCCAGAGCA GGTTGGCAAC
TCTGCGGGCC GCATCACGGC GCAGCAGATG GAGATGCTGT CCGCCGCTGC GATGCGCGAG
CTGGACGACG AAGCCCTGGG CTGGTTCAGC CGCCGCCTGC CCTGGGGCAG TTACGGCATG
CTGGCGCGCG CCAGCATCAG CTCACCCACG CTGCAAGTGG CACTGGCCCG CTGGTGCCGC
CACCACGGCC TGCTGGCGGA CGACATTGCG CTGCATCTCA CCACCACCGG CGACACTGCC
ACCCTGGCCA TCACCGAGGC GCGCGACCTG GGCGCGCTGC GCGAGTTCTG CCTGGTATCG
GTGCTGCGCA ATGCCCACGG CCTGGCCTGC TGGATGGTGG ACTCGCGTAT CCCCCTCATC
GCCGCCGAAT TTGCGTTTGA CGCGCCGCTG CATGCCGATG CGTATGCCGT GCTGTTCCGT
GGCCCTGTCA CCTTCCACGC GCCGCGCACC GCCATCCACT TTGACGCCCG ATACCTGCAC
CTGCCTCTGC GCCGCGACGA GCAGGCCCTG CGCCAGATGC TGCAGCACGC CCTGCCCCTG
ACGGTGCTGC ACTACCGCCG CGACCGCCTG CTGGTGCAGC GCGTGCGCCA GCTGCTGGCC
GCGCCCCTGC CGGGGCAACC GGCCCACGCC CTGCCCCAGC ACAGCGCCGA ATCCCTGGCC
GCACTGCTGC ATGTGTCGCC ACGCACCCTG CACCGGCAAT TGAAGGAAGA AGGCGCCACG
CTGCAGGGCC TGAAGGACGA GGTGCGCCGC ACCCGCGCGG TGGAGCTGCT GCACCGCACG
CAGCGCCCCA TCAAGCAGGT GGCCGAGGCG GCCGGGTTTG AGAACGAGAA GAGTTTTATC
CGGGCGTTTC GGGGGTGGAC GGGGCAGTCG CCGGCGGAGT TTAGAAAGGG GGGGGTGAGA
GTCTAG
 
Protein sequence
MPDRPDPAPP PPAPTALLAT PTAATPMAFV QAIVQAYAAR GMDAAQVLAL AQIPPEQVGN 
SAGRITAQQM EMLSAAAMRE LDDEALGWFS RRLPWGSYGM LARASISSPT LQVALARWCR
HHGLLADDIA LHLTTTGDTA TLAITEARDL GALREFCLVS VLRNAHGLAC WMVDSRIPLI
AAEFAFDAPL HADAYAVLFR GPVTFHAPRT AIHFDARYLH LPLRRDEQAL RQMLQHALPL
TVLHYRRDRL LVQRVRQLLA APLPGQPAHA LPQHSAESLA ALLHVSPRTL HRQLKEEGAT
LQGLKDEVRR TRAVELLHRT QRPIKQVAEA AGFENEKSFI RAFRGWTGQS PAEFRKGGVR
V