Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3757 |
Symbol | |
ID | 4672126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3984982 |
End bp | 3985896 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840787 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_987942 |
Protein GI | 121596046 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0122709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA ACATCCCCTC CCGCGTCAAG CTTGTGGACG TGGGCCCGCG CGACGGGCTG CAAAATGAGA AGCAGCCGGT GCCGGCGGCC GTCAAGATCG AATTGGTGCA CCGCCTGCAG CAGGCGGGCC TCAAGGAAAT CGAGGTCACC AGCTACGTTT CTCCGAAGTG GGTGCCGCAG ATGGCCGACA ACCACGAGGT CATGCAAGGC ATTACACGCA TGCCCGGCGT GCGCTATTCA GTGCTGACGC CCAACCTGAA AGGCTGGGAG GCGGCCGTGC TCGACAAGCC CGATGAGATC GTGGTCTTCG GCGCCGCCAG CGAGGCCTTC AGCCAGAAGA ACATCAACTG CAGCATTGCC GAGAGCATCG AGCGCTTCGC CCCCGTGGTC GAGGCCGCGC GCGCCGCTGG CGTGTATGTG CGTGGCGCCA TGAGCTGCAC CGTGGGCTGC CCCTACGAGG GCGAGATCGC GCCCGAGCGC GTGGAATACC TGGCCGGGCT CATGAAGGGC ATCGGCGTGC AGCACATCGG CGTGGCCGAC ACCATTGGCG TGGGTACGCC GCGCAAGGTG CAGCGCGCCA TCGAGGCAAC GCTCAAGCAC TACGACCTGA ACGACGTGTC CGGCCATTTT CACGACACCT ACGGCCAGGC GCTGGCCAAC ACGCTGGCGG CGCTGGAGCT GGGCGTGTGG CAGTTCGACA CGTCCGTGGC CGGCCTGGGC GGCTGTCCCT ATGCCAAGGG CGCCACGGGT AACGTGGCCA CCGAGGACGT GGTCTACATG CTGCACGGCA TGGGCATCGA GACCGGTATC GATCTGGACC AGCTGATCGA CGTCGGCGCC TACATCAGCG ACTTCCTGGG CCGCAAGCCG CAGTCGCGCG TGGCCGTGGC GGTGCTCACC AAGCGCAAGG GCTGA
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Protein sequence | MNPNIPSRVK LVDVGPRDGL QNEKQPVPAA VKIELVHRLQ QAGLKEIEVT SYVSPKWVPQ MADNHEVMQG ITRMPGVRYS VLTPNLKGWE AAVLDKPDEI VVFGAASEAF SQKNINCSIA ESIERFAPVV EAARAAGVYV RGAMSCTVGC PYEGEIAPER VEYLAGLMKG IGVQHIGVAD TIGVGTPRKV QRAIEATLKH YDLNDVSGHF HDTYGQALAN TLAALELGVW QFDTSVAGLG GCPYAKGATG NVATEDVVYM LHGMGIETGI DLDQLIDVGA YISDFLGRKP QSRVAVAVLT KRKG
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