Gene Ajs_3757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3757 
Symbol 
ID4672126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3984982 
End bp3985896 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID639840787 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_987942 
Protein GI121596046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0122709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA ACATCCCCTC CCGCGTCAAG CTTGTGGACG TGGGCCCGCG CGACGGGCTG 
CAAAATGAGA AGCAGCCGGT GCCGGCGGCC GTCAAGATCG AATTGGTGCA CCGCCTGCAG
CAGGCGGGCC TCAAGGAAAT CGAGGTCACC AGCTACGTTT CTCCGAAGTG GGTGCCGCAG
ATGGCCGACA ACCACGAGGT CATGCAAGGC ATTACACGCA TGCCCGGCGT GCGCTATTCA
GTGCTGACGC CCAACCTGAA AGGCTGGGAG GCGGCCGTGC TCGACAAGCC CGATGAGATC
GTGGTCTTCG GCGCCGCCAG CGAGGCCTTC AGCCAGAAGA ACATCAACTG CAGCATTGCC
GAGAGCATCG AGCGCTTCGC CCCCGTGGTC GAGGCCGCGC GCGCCGCTGG CGTGTATGTG
CGTGGCGCCA TGAGCTGCAC CGTGGGCTGC CCCTACGAGG GCGAGATCGC GCCCGAGCGC
GTGGAATACC TGGCCGGGCT CATGAAGGGC ATCGGCGTGC AGCACATCGG CGTGGCCGAC
ACCATTGGCG TGGGTACGCC GCGCAAGGTG CAGCGCGCCA TCGAGGCAAC GCTCAAGCAC
TACGACCTGA ACGACGTGTC CGGCCATTTT CACGACACCT ACGGCCAGGC GCTGGCCAAC
ACGCTGGCGG CGCTGGAGCT GGGCGTGTGG CAGTTCGACA CGTCCGTGGC CGGCCTGGGC
GGCTGTCCCT ATGCCAAGGG CGCCACGGGT AACGTGGCCA CCGAGGACGT GGTCTACATG
CTGCACGGCA TGGGCATCGA GACCGGTATC GATCTGGACC AGCTGATCGA CGTCGGCGCC
TACATCAGCG ACTTCCTGGG CCGCAAGCCG CAGTCGCGCG TGGCCGTGGC GGTGCTCACC
AAGCGCAAGG GCTGA
 
Protein sequence
MNPNIPSRVK LVDVGPRDGL QNEKQPVPAA VKIELVHRLQ QAGLKEIEVT SYVSPKWVPQ 
MADNHEVMQG ITRMPGVRYS VLTPNLKGWE AAVLDKPDEI VVFGAASEAF SQKNINCSIA
ESIERFAPVV EAARAAGVYV RGAMSCTVGC PYEGEIAPER VEYLAGLMKG IGVQHIGVAD
TIGVGTPRKV QRAIEATLKH YDLNDVSGHF HDTYGQALAN TLAALELGVW QFDTSVAGLG
GCPYAKGATG NVATEDVVYM LHGMGIETGI DLDQLIDVGA YISDFLGRKP QSRVAVAVLT
KRKG