| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3756 |
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| Symbol | |
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| ID | 4672127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3983234 |
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| End bp | 3984967 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639840786 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_987941 |
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| Protein GI | 121596045 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.40748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TTCGCGCCTG CCTGCTCTTG TGGCTTCTCG TCGGCAAACT GGCCTGGGCC
GGTGGCGCCC CTGCGGTGCT GGACGATCAC CGCAAGGGCC TATCGCTGGG AAGCACCGGC
CAGCTTTTGT GGCTCGTGGA CGACCTTGGC ACCCTCACCA TCGACGATGT GCGCGCAGCG
GCTACCGATG CGCGCTTCGG CCCGCCCCCC CGCATGCCGC TGCGCGGGGC CACACCGGCC
TACCACTGGT TCAAAGTGGT CCTGGAGCAG CGCGCGGCCA GCGGCGACTG GGTGCTGGCC
ACCCAGACCA CGTCTTTGCA GGACGTGCGG TTCTACGGCC CGTTCGATGC GTCGGGTACG
GCGCTTGCGC CGCCAGTGCA CACGGGCCTG GCGCAGCCCT TCGCCACGCG GCCCCTGGGC
AGCGAGCGCT ACCTCACGCG CCTGCAGCCC CCGGGCCCGG GCACCTACAC GGTCTACGCC
CGGCTGTACA GCGAGACGGC GCCGTCCTTC GACCTGTCCG TCTGGGACAC GGCCGAATAC
CTGCAATGGC GCCAGCACAA GCGGCTGTTC GACGGCATCT GCTACGGCAT CCTGATCGCA
CTGCTGGTCT ACAACCTCAC GCTCGTGGGC ATCTTTCGGG ACACCACGTA CACCTTCTAC
GTCGGCCAGT GCATCTTCGC GCTGTTGACG CTGGCCACCT TCAACGGCCA CACGGCCCAT
TACCTGTGGG GCGACGCGCC GTGGTGGCAG GAGCGCAGCT ATTTCGTATT GCCCAGCCTG
TGGCTGTTCT TCGGCGCGCT GTTCACGCGC AGTTTCCTGG ACACCCGGCA GACGCCCTTG
ATGGACGGAG TGCTGGTGGC AATCGGCCTG CTGGCGGCGC TCACCGCCGT GCTCGGCGGG
CTCGGGCAAT TTGCCATCGC CCAGACGCAG AACGAACTGC TGGCCAGCGC CGGCATCGCG
GCCGCGTCGC TCGCGGCCAT TCTGGTGCTG CGCCGAGGCT TCACGCCCGC GCGCTGGTAC
CTGGGCGCGC AGGCGCTGCT GTTCGTCACG GTGGCCGGCG TGGTGCTGAG CAACTGGAAG
GTGATCGACG CGCCCTTCAT GCTGGCCAAC GGCCTGCAGA TCGGCGTGGC GGCCGAGATG
GTGGTGTTCG CCGTTGCGTT GAGCACCCGC ATCGACAGCC TGAATGCCTC CCAGATCGCC
CTGCGGCTGC GCGCGGACCA TCTGGCCAAG GCCGCGACCA CCGACCCTCT CACGGGTCTG
ACCAACCGCA TGGGGTTGAC CCAGGGCGCA ACGCAACTGC TGTCGGAAGG GGGCACGCAC
GCCCTGCTGC TGCTCGACCT GGACCGCTTC AAACCCATCA ACGACACCTA TGGCCATGAC
GCCGGCGACG AGGTGCTGCG CGCCGTTGCC ACACGGCTGC AGACGCACAC GCGGTCCGGC
GACATCGTGG CCCGGCTGGG CGGTGACGAG TTCGTGGTCA TGCTGGCCCA CGCGCCCGCG
GGCGACGACC TGACGGCGCT GGTCAAGCAT CTGGAGTTGG CTATCTGCCA GCCGGTGTAC
TTCCAGCACC AGGAACTGTG CGTGGGCGGC AGCACGGGCG TTGCGCACAG CCCGCAGGAC
GGCGCCACGC TGACGGAGCT GATGCGCTGC GCCGACCAGC GCATGTACCA GGCCAAGCAG
GCGCACAAGG ACGCGGCGCA GCACCCGGCA GCGCCGGCTC TGCCGTTGGC CTGA
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| Protein sequence | MNLLRACLLL WLLVGKLAWA GGAPAVLDDH RKGLSLGSTG QLLWLVDDLG TLTIDDVRAA
ATDARFGPPP RMPLRGATPA YHWFKVVLEQ RAASGDWVLA TQTTSLQDVR FYGPFDASGT
ALAPPVHTGL AQPFATRPLG SERYLTRLQP PGPGTYTVYA RLYSETAPSF DLSVWDTAEY
LQWRQHKRLF DGICYGILIA LLVYNLTLVG IFRDTTYTFY VGQCIFALLT LATFNGHTAH
YLWGDAPWWQ ERSYFVLPSL WLFFGALFTR SFLDTRQTPL MDGVLVAIGL LAALTAVLGG
LGQFAIAQTQ NELLASAGIA AASLAAILVL RRGFTPARWY LGAQALLFVT VAGVVLSNWK
VIDAPFMLAN GLQIGVAAEM VVFAVALSTR IDSLNASQIA LRLRADHLAK AATTDPLTGL
TNRMGLTQGA TQLLSEGGTH ALLLLDLDRF KPINDTYGHD AGDEVLRAVA TRLQTHTRSG
DIVARLGGDE FVVMLAHAPA GDDLTALVKH LELAICQPVY FQHQELCVGG STGVAHSPQD
GATLTELMRC ADQRMYQAKQ AHKDAAQHPA APALPLA
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