Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3752 |
Symbol | |
ID | 4672203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3979560 |
End bp | 3981254 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639840782 |
Product | major facilitator superfamily transporter |
Protein accession | YP_987937 |
Protein GI | 121596041 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.875294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCA GCACTGCATA CGCCGGCCGC CCCGGCGCTG CCCCCCGACC GATGTCGGCG GAAGAAAAGA AGGTGATCTT CGCCTCGTCC CTCGGCACCG TGTTCGAGTG GTACGACTTC TACCTCTACG GCTCGCTCGC GGCCATCATT GCCAAGCAGT TCTTCAGCGG GCTGGATGCT GGCGCGGCGT TCATCTTCGC GCTGCTGGCC TTCGCGGCCG GCTTCCTGGT GCGCCCGTTC GGTGCGCTGG TGTTCGGCCG CCTGGGCGAC ATGATCGGGC GCAAGTACAC CTTCCTGGTG ACCATCCTGA TCATGGGCAT CTCGACCTTC ATCGTCGGTG TGCTGCCCAG CTACGCCAGC ATCGGCATCG CGGCACCGGT CATCCTGATC GCGCTGCGCA TGCTGCAAGG CCTGGCGCTG GGCGGTGAAT ACGGCGGTGC GGCCACCTAC GTGGCCGAGC ACGCGCCCCA TGGCCGCCGT GGTGCCTACA CCTCGTGGAT CCAGACCACG GCCACGCTGG GCCTGTTCCT GTCGCTGCTG GTGATTCTGG GCACCCGCAC CATACTGGGC GAGCCCGTGT TCAACGACTG GGGCTGGCGC ATTCCGTTCC TGGTGTCCAT TCTGCTGCTG GGCATCTCGG TGTGGATTCG CCTGTCGCTG TCCGAGTCGC CGGCCTTCCA GAAAATGAAG GCCGAGGGCA AGACGTCGAA GGCGCCGCTG TCCGAGTCGT TCGGCGAATG GAAGAACCTG AAGATCGTGA TCCTGGCGCT GGTGGGCCTG ACCGCCGGCC AGGCCGTGGT GTGGTACACG GGCCAGTTCT ATGCGCTGTT CTTCCTGATG CAGCAGCTCA AGGTGGATGC CGTCACGGCC AACCTGATGA TCGCCGCCGC GCTGCTGATC GGCACCCCGT TCTTCGTGGT GTTCGGCTCG CTGTCCGACA AGATCGGCCG CAAGCCCATC ATCATGCTGG GTTGCGTGCT GGCCGTGCTG ACCTACTTCC CGGCCTTCAA GATGCTGACG GAAGCCGCCA ACCCCGACCT GGCCAAGGCC CAGGCGACAG CGGGTGTCGT GGTGACCGCC GATCCCGCCA CCTGCTCGTT CCAGGGCAAC CCCGTGGCAC GCGAGATCGA CTTCAAGAGC TCCTGCGACA TCGCCAAGCG CTACCTGGTG CAGAACTCGG TGAGCTATGA GAACGTGGCC GGCCCCGCGG GCTCGCCCGC GGTCGTGAAG ATCGGCGAAA AGACCATCAC CGCGCCCACC GGCAACGTGG TCAACCACAA GTTCGACGAG GCAAGCGTGA AGGCCATCGC CGCCTTCAAG AAGGAGATGG CCGAATACCT GAAGCTCGCC GGCTACCCCT CCAAGGCCGA TCCCGCCAAG ATGAACAAGG TGATGATGAT CGTCATCCTG ACGTATCTGG TGATCCTGGT GACCATGGTC TACGGCCCCA TCGCGGCCAT GCTGGTGGAA CTGTTCCCCA CGCGCATCCG CTATACCTCC ATGAGCCTGC CGTACCACAT CGGCAATGGC TGGTTCGGCG GCCTGCTGCC CACGACATCG TTCGCCATCG TGGCGTCCAC CGGCAATATG TATAACGGCC TGTGGTACCC CATCATCATC GCCGGCATGA CGGCAGTGAT CGGCACGCTG TTCATCCGCG AAACCAAGGA CGTGGACATC TACGCCAACG ACTGA
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Protein sequence | MATSTAYAGR PGAAPRPMSA EEKKVIFASS LGTVFEWYDF YLYGSLAAII AKQFFSGLDA GAAFIFALLA FAAGFLVRPF GALVFGRLGD MIGRKYTFLV TILIMGISTF IVGVLPSYAS IGIAAPVILI ALRMLQGLAL GGEYGGAATY VAEHAPHGRR GAYTSWIQTT ATLGLFLSLL VILGTRTILG EPVFNDWGWR IPFLVSILLL GISVWIRLSL SESPAFQKMK AEGKTSKAPL SESFGEWKNL KIVILALVGL TAGQAVVWYT GQFYALFFLM QQLKVDAVTA NLMIAAALLI GTPFFVVFGS LSDKIGRKPI IMLGCVLAVL TYFPAFKMLT EAANPDLAKA QATAGVVVTA DPATCSFQGN PVAREIDFKS SCDIAKRYLV QNSVSYENVA GPAGSPAVVK IGEKTITAPT GNVVNHKFDE ASVKAIAAFK KEMAEYLKLA GYPSKADPAK MNKVMMIVIL TYLVILVTMV YGPIAAMLVE LFPTRIRYTS MSLPYHIGNG WFGGLLPTTS FAIVASTGNM YNGLWYPIII AGMTAVIGTL FIRETKDVDI YAND
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