Gene Ajs_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3745 
Symbol 
ID4672286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3967730 
End bp3968773 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content69% 
IMG OID639840775 
Productdihydroorotase 
Protein accessionYP_987930 
Protein GI121596034 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCACCGACAC CCTCACGATC ACCCGCCCCG ACGACTGGCA CCTGCACGTG 
CGCGACGGGG AGCCGCTGCG CACCGTGGTG CCGCACACGG CCGCGCAGTT CGGCCGCGCC
ATCATCATGC CCAACCTGCG ACCGCCGGTG ACCACGGCGC AGCAGGCCGC TGAGTACAAG
CAGCGCATCC TCGCCGCCGT TCCGGAGGGG GTGGCCTTCG AGCCGTTGAT GACGCTCTAC
CTCACCGACA ACCTGCCGCC CGACGAGATC GCGCGTGCCA GGGATGCGGG CGTGGTCGCC
GCCAAGCTCT ACCCCGCAGG CGCCACCACC AACAGCGACG CGGGCGTGAC CGATCTGCGC
AAGACCTACA AGACGCTGGA GGCCATGCAG AAGGCCGGTC TGCTGCTGCT GGTGCATGGC
GAGGTGACCA GCAGCGACAT CGACCTGTTC GACCGCGAGG CGGTGTTCAT CGAGCAGCAA
CTCATTCCGC TGCGCCGCCA CTTCCCCGAA CTGAAGATCG TCTTCGAGCA CATCACCACG
AAAGAGGCGG CGCAGTACGT GAAGGAGGCT GGCCGCTTCA CGGCCGCCAC CATCACCGCG
CACCACCTGC TGTACAACCG CAACGCCATC TTCACCGGCG GCATCCGCCC GCACTACTAC
TGCCTGCCCG TGCTCAAGCG CGAGGTGCAC CGCCAGGCGC TGGTGCAAGC GGCCACCAGC
GGCAGCGACA AGTTCTTCCT GGGCACCGAC AGCGCGCCGC ACCCCGCGCA CCTGAAGGAG
CATGCCACCG GCTGCGCGGG CTGCTATACC GCGCACGCCG CCATCGAGAT GTATGCCGAA
GCCTTCGACA ACGCGGGCGC GCTGGACAAG TTGGAAGGCT TTGCCAGCGT CCACGGCCCG
GCGTTCTACG GTCTGCCGCG CAACACGGGC ACGGTCACGC TGCGCCGCGA GAGCTGGACG
CCGCCCGACA GCTTCGCCTT CGGCGAAGCC GCGCTCAAGC CGCTGCGCGC GGGCGAGGCG
CTGCCCTGGC GCCTGGTGGC ATAA
 
Protein sequence
MTATTDTLTI TRPDDWHLHV RDGEPLRTVV PHTAAQFGRA IIMPNLRPPV TTAQQAAEYK 
QRILAAVPEG VAFEPLMTLY LTDNLPPDEI ARARDAGVVA AKLYPAGATT NSDAGVTDLR
KTYKTLEAMQ KAGLLLLVHG EVTSSDIDLF DREAVFIEQQ LIPLRRHFPE LKIVFEHITT
KEAAQYVKEA GRFTAATITA HHLLYNRNAI FTGGIRPHYY CLPVLKREVH RQALVQAATS
GSDKFFLGTD SAPHPAHLKE HATGCAGCYT AHAAIEMYAE AFDNAGALDK LEGFASVHGP
AFYGLPRNTG TVTLRRESWT PPDSFAFGEA ALKPLRAGEA LPWRLVA