Gene Ajs_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3742 
Symbol 
ID4672296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3965056 
End bp3965934 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID639840772 
Productheat shock protein HtpX 
Protein accessionYP_987927 
Protein GI121596031 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TTGCGCTCTT TTTGCTGACC AACGTCGCCG TCGTGGTGGT GCTGGGCATC 
GTTGCCAGCC TGCTGGGCGT GAACCGCTAC CTGACGGCCA ACGGCCTGAA CCTGGGCGCC
CTGTTGGGCT TTGCCTTCAT CATGGGTTTT GGCGGCGCCA TCATCTCGCT CCTGATGAGC
AAGCCGATCG CCAAGATGAG CATGGGCGTG CAGATCATCA ACGCGCCGCG CAATGCCGAC
GAGGCCTGGA TCGTCGAGAC CGTGCGCCGC TTCTCCGAAA AGGCTGGCAT CCAGATGCCC
GAAGTCGGCA TTTACGAGGG CGAGCCCAAT GCCTTCGCCA CGGGCGCGTT CAAGAACTCG
GCCCTGGTCG CCGTCTCCAC GGGTCTCTTG CAGGGCATGA CGCGCGAGGA GGTCGAGGCC
GTGATCGGCC ACGAGGTCGC GCACGTGGCC AATGGAGACA TGGTCACCAT GGCGCTGATC
CAGGGCGTGA TGAACACCTT CGTGGTGTTC CTGTCGCGCG TGATCGGCTA CGCGGTGGAC
AGCTTCCTGC GCAGGAACGA CGAGAACAGC TCGGGCCCCG GCATCGGCTA CATGATCACC
ACCATCGTGC TGGACATCGT GCTGGGCTTC CTGGCTGCCA TCATCGTGGC CTGGTTCTCG
CGCCAGCGCG AGTTCCGCGC CGACGCCGGC GCCGCCCAGC TCATGGGGCG CAAGCAGCCC
ATGATCAACG CGCTGCACCG TCTGGGCGGC ATGCGCCCGG GCGCCATGCC CCAGAGCCTG
CAGGCCATGG GCATCACGGG CAACATCGGC AAGCTGTTCA GCTCGCACCC GCCCATCGAG
GAGCGCGTGG CCGCACTGCA AAACAGCCAG AGCGCCTGA
 
Protein sequence
MKRIALFLLT NVAVVVVLGI VASLLGVNRY LTANGLNLGA LLGFAFIMGF GGAIISLLMS 
KPIAKMSMGV QIINAPRNAD EAWIVETVRR FSEKAGIQMP EVGIYEGEPN AFATGAFKNS
ALVAVSTGLL QGMTREEVEA VIGHEVAHVA NGDMVTMALI QGVMNTFVVF LSRVIGYAVD
SFLRRNDENS SGPGIGYMIT TIVLDIVLGF LAAIIVAWFS RQREFRADAG AAQLMGRKQP
MINALHRLGG MRPGAMPQSL QAMGITGNIG KLFSSHPPIE ERVAALQNSQ SA