Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3739 |
Symbol | |
ID | 4672318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3961397 |
End bp | 3963514 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639840769 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_987924 |
Protein GI | 121596028 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCTG CCGCCCAGGC CCCTGAAGTC CAGACCCGCC GCGAAGGCGC GGTGCTGGTG GTCAGCATCA ACAACCCGCC CGTCAATGCC CTGGGGCAGG CGGTGCGCGC CGGCTTGCTG GCCGCGGTGG AGCAGGCCGA GGGCGATGCC GCCGTGCGCG CCCTGCTGAT CGTGGGCGAG GGCAAGGCCT TCATCGCCGG TGCCGACATC CGCGAGTTCG GCAAGCCCCA GGTGCCGCCG TCGCTGCCCG AGGTGTGCAA CCGCCTGGAG TCCTGCGGCA AGCTGGTGGT CGCCGCCATC CACGGCGCCG CGCTGGGCGG CGGGCTGGAA GTGGCGCTGT CTGCGCACTA CCGCCTGGCC TTGCCCGCGG CCAGCCTGGG CCTGCCCGAG GTGAACCTGG GCCTGCTGCC CGGCGCCGGC GGCACCCAGC GCGCGCCGCG CCTGATGGGC GTGAAGGCGG CAGCCGAGCT GATGCTCAGC GGCAAGCATT TGAGCGCCAA GGCCGCCGCC GCGGCGGGCC TGGTGGACCG ACTGGTCGAA GGCACCGACC CCGTGGCCGC CGGCCTGGCC TACGCCAACG AGCTGCTGGC CCAGGGCGCG CAGCCGCGCC GCACGCGGGA CCTGAAGATT GCCGACCAGG CCGCCGCGCT GGCCGAGCTG GACGCGCTGG CGCTTGAGAC CGCCAAGAAG ACCCGCGGCC TGTTCTCGCC CGGCAAGATC GTGGAATGCG TGCGAGCCGC TGTGGAGCTG CCGTTCGACG AGGGCATCGC CAAGGAGCGC GCGCTGTTCG TCGAATGCCT GAACAGCCCG CAGCGCCAGG GCCTGGTGCA CGCGTTCTTC GCCGAGCGCG AGACCGCCAA GATCCCCGAG GCGCAGGCCG CCGCGCCGCG CCACTTTGCC AAGATCGCCA TCATCGGCGG CGGCACCATG GGCGCAGGCA TCACCGTCGC CGCGCTGGAC GCAGGCCTCA CCGTGACCAT GATCGAACGC GACGCCGAGT CCATCGCGCG CGGCCAGAAG AACGTCGAGA AGGTCTACGA CGGCCTGATC GCCAAGGGCC GCATGACCGC GGAAGGCAAG GCCGCCATCC TGGCGCGCTA CACGCCCAGC ACCCGCTACG ACGACATCGC CGATGTGGAC CTGGTGATCG AGGCCGTGTT CGAGGACCTG GAGGTCAAGA AGGCCGTGTT CAAGGAGCTG GACCGCGTCT GCAAGCCGGG CGCGGTGCTG GCCACCAACA CCTCGTACCT GGACATCGAC GCGATTGCCG CAGTCACCTC GCGCCCGCAG GATGTGATCG GCCTGCATTT CTTCAGCCCG GCGAACATCA TGAAGCTGCT GGAGATCGTG GTGCCCGCCA AGGTGGCGCC CGACGTGGTG ACCACCGCCT TCGCGCTGGC CAAGAAGATG AAGAAGGTGC CCGTGCGCGC CGGCGTGTGC GACGGCTTCA TCGGCAACCG CATCCTGGCC GTGTACAAGC AGGCGGCTGA CTACCTGATG GAAGACGGCG CCAGCCCCTA CGAGATCGAC GAGGCCGTGC GCGGCTTCGG CTTTGCGATG GGCCCGTTCC AGGTGACCGA CCTGGCCGGT GGCGACATCG GCTGGGCCAC GCGCAAGCGG CGCGCCGCCA CGCGCGACCC TCAGGCCCGC TACGTCGAGG TGGCCGACCG CGTCTGCGAG CGCGGCTGGT TCGGCCAGAA GACCGGCCGG GGCTTTTACC TCTACCCGCA GGGCGCCCGC GTGGGCCAGC CCGACCCCGA GGTGCTGGCC ATCGTGGACG CCGAGCGCGC CAAGAAGGGC ATCACGCCGC GCCAATTCAC GGCCGACGAG ATCATGCGCC GCTACATGGC TGCCATGGTC AACGAAGGCG CCAAGGTGGT GCAAGAGGGC ATTGCCCTGC GCCCGCTGGA TGTGGACGTG ACCTTCCTGT CCGGCTACGG TTTTCCGCGC TGGCGCGGCG GCCCGATGAA GTGGGCCGAC ATGACGGGCC TGGACAAGGT GCTGGCCGAC ATCCGCGCCT TCGAGAAGGA AGACCCGCTG TTCTGGAAGC CCGCGCCGCT GCTGGAGCAG CTGGTGGCCG AGGGCCGCAA CTTCGACAGC CTGAACAAGG CAGCTTGA
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Protein sequence | MSPAAQAPEV QTRREGAVLV VSINNPPVNA LGQAVRAGLL AAVEQAEGDA AVRALLIVGE GKAFIAGADI REFGKPQVPP SLPEVCNRLE SCGKLVVAAI HGAALGGGLE VALSAHYRLA LPAASLGLPE VNLGLLPGAG GTQRAPRLMG VKAAAELMLS GKHLSAKAAA AAGLVDRLVE GTDPVAAGLA YANELLAQGA QPRRTRDLKI ADQAAALAEL DALALETAKK TRGLFSPGKI VECVRAAVEL PFDEGIAKER ALFVECLNSP QRQGLVHAFF AERETAKIPE AQAAAPRHFA KIAIIGGGTM GAGITVAALD AGLTVTMIER DAESIARGQK NVEKVYDGLI AKGRMTAEGK AAILARYTPS TRYDDIADVD LVIEAVFEDL EVKKAVFKEL DRVCKPGAVL ATNTSYLDID AIAAVTSRPQ DVIGLHFFSP ANIMKLLEIV VPAKVAPDVV TTAFALAKKM KKVPVRAGVC DGFIGNRILA VYKQAADYLM EDGASPYEID EAVRGFGFAM GPFQVTDLAG GDIGWATRKR RAATRDPQAR YVEVADRVCE RGWFGQKTGR GFYLYPQGAR VGQPDPEVLA IVDAERAKKG ITPRQFTADE IMRRYMAAMV NEGAKVVQEG IALRPLDVDV TFLSGYGFPR WRGGPMKWAD MTGLDKVLAD IRAFEKEDPL FWKPAPLLEQ LVAEGRNFDS LNKAA
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