Gene Ajs_3732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3732 
Symbol 
ID4672763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3953414 
End bp3954388 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID639840762 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_987917 
Protein GI121596021 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCC GCATCACCGA GCTCTTCGGC ATAGAGCACC CGATCCTCCA GGGCGGCATG 
CACCACGTGG GGTATGCCGA GCTGGCCGCA GCCGTCTCCA ATGCCGGAGG GCTGGGCATC
ATCACCGGCC TGACGCAGAA GACGCCCGAG TTGCTGGCGC AGGAGATCGC ACGCTGCCGC
ACGATGACCG ACAAGCCGTT CGGCGTGAAC CTCACGTTCC TGCCGTCGGT GAATCCGCCC
GACTACCCGG GCTATGTGAA GGCGATCATC GAGGGCGGCG TGAAGATCGT CGAGACGGCA
GGCAACAACC CGCAGAAGTG GATGCCCGCG CTGAAGGAGG CCGGCATCAA GGTCATCCAC
AAGTGCACCT CGGTGCGCCA CGCGCTCAAG GCCGAGTCCA TCGGCTGCGA CGCGATCAGC
GTGGACGGCT TCGAATGCGG CGGCCACCCG GGCGAGGACG ACATTCCCAA CTTCATCCTG
CTGCCGCGCG CTGCCGAAGA ACTCAAGATC CCCTTCGTCG CCTCGGGCGG CATGGCCGAT
GGGCGCAGCC TGGTGGCTGC GCTGGCGCTT GGCGCTGACG GCATCAACAT GGGCACGCGC
TTCATCGCCA CCCAGGAAGC GCCGGTGCAC GAGAACGTCA AGCAGGCGAT CGTTGCGGCC
TCCGAACTGG ATACGCGGCT CATCATGCGC CCGCTGCGCA ATACCGAGCG CGTGCTCACC
AACAGCGCCA CCGAGCGCGT GCTGGACAAG GAGCGCGCAC TGGGCGCCGC CATCACCTTC
GCGGACATTG CGCCCGAGGT GGCCGGCGTC TACCCGCGCA TCATGCAGCA GGGCGACATG
CAGGCCGGCG TGTGGTCCTG CGGCATGGTT GCCGGGCTGA TCCATGACGT GCCCACTGTG
CAGCAGCTCA TCGACTCCAT CATGTCCCAG GCCGAAGCGC TGATCTCCCA GCGCCTGGCG
GGCATGCTCC GATAA
 
Protein sequence
MKTRITELFG IEHPILQGGM HHVGYAELAA AVSNAGGLGI ITGLTQKTPE LLAQEIARCR 
TMTDKPFGVN LTFLPSVNPP DYPGYVKAII EGGVKIVETA GNNPQKWMPA LKEAGIKVIH
KCTSVRHALK AESIGCDAIS VDGFECGGHP GEDDIPNFIL LPRAAEELKI PFVASGGMAD
GRSLVAALAL GADGINMGTR FIATQEAPVH ENVKQAIVAA SELDTRLIMR PLRNTERVLT
NSATERVLDK ERALGAAITF ADIAPEVAGV YPRIMQQGDM QAGVWSCGMV AGLIHDVPTV
QQLIDSIMSQ AEALISQRLA GMLR