Gene Ajs_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3726 
Symbol 
ID4672689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3947191 
End bp3948258 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content72% 
IMG OID639840757 
Producthypothetical protein 
Protein accessionYP_987912 
Protein GI121596016 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.478649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCC CTGCCACTTC GCCTGTCCAC ACCGCGCGCC GCCGTCGCCG CAGCGGGTGG 
CGCCGCTTAC GGGGCTGGCG CTGGCTGGCC GGCGTGGCCA TGGCAGCGGT GGCCGCCCTG
GTGGCATGGC TGCTGGTGCG CCAGGGCCTG CAGGTGGACT GGCCCGGCGT GTGGCAGGCG
CTGCGTGCGC TGCCTGTGCC CACGCTGGCT GCAGCCGCAG CCCTGGCCTG GGCCGGCCAC
CTGGTGTACG GGTGCTTCGA CCTGTTCGGT CGCCACGTGG TACGCCACAG GCTGGGCGCC
GCCCGCACCA TGGGCGTCAC GCTGATCGCT TACCCCTTCA CGCTCAACCT GGGCTCGCTG
ATCGGTGGCG CTTCGGTGCG CTACCGGTTG TATTCGCGCC AGGGCCTGGA TGTGGGCCAG
ATCGCGCAGG TGATCAGCCT GTCCATCGCC ACCAACTGGC TGGGCTACTG CGTGCTGGCC
TGTGCGCTGT TCTGGGCCTG GACACCGCCG CTGCCCGAGG GTTGGCGCAT GGGCAGCGGC
CAGCTCCCTT GGCTGGGCAC GGTGCTGGCC TGCGTGGCGC TGGGCTACCT GGCGCTGTGC
GCGCAGCGCG GCGGGCACCG ACCGCTGATG CTGCGCGGGC GACGCCTGCC GCTACCGACC
TGGCGCGTGG CGCTGCTGCA GTTGGTGCTG TCGTGCACCC ACTGGGCGTT AATGGCCGCG
TCCGTGTGGG TGCTGGCGCG CCAGCAGGTG CCCTACGCCG CGGCGCTGGC CACGGTGCTG
CTGGGCGCGG TGGCCGGGCT GGTCTCGCGC ATCCCCGCCG GCCTGGGTGT GCTGGAGGCC
GTGGGTACGG CCGTGCTGGC CGTGCACCTG CCCGTGAGCC AGGCGCTGGC CGTGGTGCTG
GCCTTCCGCG CGGTGTACTA CTTCGCACCG CTCGCGCCCG CGGCGCTGGC CCTGCTGGCG
ACCGAGCTGT GGTGGCGGCG GCATCAGCCG ACCACCAGTT CTCAAGCAAA TCAGCCCCTA
GCGCTTTTCA GACAAGCGCA AGCAGCTATT AATACAATAG CAAATTGA
 
Protein sequence
MHAPATSPVH TARRRRRSGW RRLRGWRWLA GVAMAAVAAL VAWLLVRQGL QVDWPGVWQA 
LRALPVPTLA AAAALAWAGH LVYGCFDLFG RHVVRHRLGA ARTMGVTLIA YPFTLNLGSL
IGGASVRYRL YSRQGLDVGQ IAQVISLSIA TNWLGYCVLA CALFWAWTPP LPEGWRMGSG
QLPWLGTVLA CVALGYLALC AQRGGHRPLM LRGRRLPLPT WRVALLQLVL SCTHWALMAA
SVWVLARQQV PYAAALATVL LGAVAGLVSR IPAGLGVLEA VGTAVLAVHL PVSQALAVVL
AFRAVYYFAP LAPAALALLA TELWWRRHQP TTSSQANQPL ALFRQAQAAI NTIAN