| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3724 |
|---|
| Symbol | |
|---|
| ID | 4672855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3945126 |
|---|
| End bp | 3945965 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639840755 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_987910 |
|---|
| Protein GI | 121596014 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.236792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCATC GCCCTCCGCT GCCGCGCTGC GGTGCGCCCC CCGGCAGCGG GCCGGCATTG
GATTTCCCCA TGACTCAGAA CCCGCCCTCT TCCTCCCCCG TCGCGTTCAA GGTGCTGACC
GTGAACGTGC ACAAGGGGTT CACGTCCTTC AACCGCCGCT TCATGTTGCA CGAGTTGCGC
GAGGCGGTGC GCCAGGTATC GGCCGACCTC GTGTTCCTGC AGGAGGTGCT GGGCACGCAC
CAGCGCCATG CGGGGCGCGT GACCAATTTC CCACAGGAGC CGCACTACGA GTTCCTGGCC
GACTCCATCT GGACGCAGTA CGCCTATGGC CGCAACGCGG TCTACACCGA TGGCCACCAC
GGCAACGCGT TGCTGTCCAA GTTCCCGATC GTGCACTACG AGAACCACGA CATCTCGGTC
AGCGGCCCGG AACGCCGCGG CATGCTGCAC TGCGTGCTGC AGCCGCCCCA GCATGCACGG
CCGGTCCATG CCATCTGCGT ACACTTGGGC CTGCAGGAGG CGCACCGCCA GCAGCAGTTG
CGCCGCGTGT CCGCGCTGGT GCATTCGTTT CCCGCGCAGG ACCCGGTGAT CGTCGCGGGT
GACTTCAACG ACTGGCGCGG CCGCGCGCAC GACGTGCTGC AGCGCGAAGC CGGCCTGCAT
GAAGTGTTCG TGCAAGCCTG CGGGCGTGCA GTGCGCACCT TTCCCGCATC GCTGCCGCTG
CTGCCGCTGG ACCGCATCTA TGTGCGCGGC ACCTCGGTGC ACACGCCGAT GAGCCTGCCG
CGCAGGCCCT GGAACCGCCT GTCGGACCAT GCGCCGCTGG CCGCGGAGAT CCTCCTGTGA
|
|---|
| Protein sequence | MPHRPPLPRC GAPPGSGPAL DFPMTQNPPS SSPVAFKVLT VNVHKGFTSF NRRFMLHELR
EAVRQVSADL VFLQEVLGTH QRHAGRVTNF PQEPHYEFLA DSIWTQYAYG RNAVYTDGHH
GNALLSKFPI VHYENHDISV SGPERRGMLH CVLQPPQHAR PVHAICVHLG LQEAHRQQQL
RRVSALVHSF PAQDPVIVAG DFNDWRGRAH DVLQREAGLH EVFVQACGRA VRTFPASLPL
LPLDRIYVRG TSVHTPMSLP RRPWNRLSDH APLAAEILL
|
|---|
| |