Gene Ajs_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3718 
Symbol 
ID4672920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3938632 
End bp3939480 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID639840749 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_987904 
Protein GI121596008 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTT CGACCGTTGG CATCATCGGC GCGGGCACCA TGGGCAACGG CATTGCCCAG 
GCATGCGCTG TGTCGGGCAT CAATGTGGTG ATGGTGGACA TCTCCGACGC CGCCGTGCAA
AAGGGCGTGG CCACCGTAGC AGGCAGCCTG GACCGCCTGA TCAAGAAAGA AAAGATCACC
GAAGCCGACA AGAGCGCCGC CCTCGCGCGC ATCAAAACCT CCACCAGCTA CGACGACCTG
AAGGCCGCCC AGATCGTGAT CGAGGCTGCC ACCGAGAACT ACGAACTCAA GCTCAAGATC
CTCAAGCAGG TGGACGCGCT GGTGGCGCCC GAAGTGATCA TTGCGTCCAA CACCTCTTCG
ATCTCCATCA CCAAGCTGGC GGCCGCCACG TCGCGCGCCG ACCGGTTCAT CGGCATGCAT
TTCTTCAACC CCGTGCCGAT GATGGCGCTG GTGGAGATCA TTCGCGGCCT GCAGACTTCC
GACGCCACGC ACGACACGGT GAAGCAGCTC TCCGAGCGCC TGGGCAAGTC GCCCATCACC
GTGAAGAACG CCCCCGGCTT CGTGGTCAAC CGCATCCTGG TGCCCATGAT CAACGAGGCC
TTCTTCGTGC TGGCAGAGGG CCTGGCAACG CCCGAGGACA TCGACGCCGG CATGAAGCTC
GGCTGCAACC AGCCCATCGG CCCGCTGGCG CTGGCCGACA TGATCGGCCT GGACGTGTGC
CTGGCCGTGA TGGACGTGTA CCTGACCGAG TTCGGCGACA GCAAGTACCG CCCCTGCCCG
CTGCTCAAGG AGATGGTGGC CGCCGGCCGC CTGGGCCGCA AGACCGGCCG CGGCGTGTAC
CAGTACTGA
 
Protein sequence
MTISTVGIIG AGTMGNGIAQ ACAVSGINVV MVDISDAAVQ KGVATVAGSL DRLIKKEKIT 
EADKSAALAR IKTSTSYDDL KAAQIVIEAA TENYELKLKI LKQVDALVAP EVIIASNTSS
ISITKLAAAT SRADRFIGMH FFNPVPMMAL VEIIRGLQTS DATHDTVKQL SERLGKSPIT
VKNAPGFVVN RILVPMINEA FFVLAEGLAT PEDIDAGMKL GCNQPIGPLA LADMIGLDVC
LAVMDVYLTE FGDSKYRPCP LLKEMVAAGR LGRKTGRGVY QY