Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3717 |
Symbol | |
ID | 4672924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3936924 |
End bp | 3938519 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639840748 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_987903 |
Protein GI | 121596007 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.975922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAGT TCGACTATGT CGTGATCGGT GGCGGCTCGG CGGGCTGCGT GCTGGCGGGG CGGCTGAGCG AGGACCCCAC GGTGCGCGTG TGCCTGCTGG AGGCGGGCGG CAGCGATGCC AGTGTGCTCA TCCATTGCCC GGCGGGGCTG GCCGCCATGG CGCGCAGCGG CGCCTTCAAC TGGGGGCTGC ACACCACGCC GCAGGCGGGC CTGGGCGGGC GTCGGGGCTA CCAGCCGCGC GGCAAGGTGC TGGGTGACTC CAGCTCGGTC AACGCCATGA TCTACGCGCG CGGCCACGCC AGCGACTACG ACCACTGGGC TGCGGCCGGC AATGCAGGCT GGGGCTGGAA CGACGTGCTG CCGTACTTTC TTCGGGCCGA GCACAACGAG CGCGGTGCAA GCGCCTGGCA CGGCACGGAC GGGCCGCTGA ATGTGGCGGA CCTGCAGTCG CCGCAGCGTG CCAGTCGCGC CTTCGTCGAA GCCGGCGTGC AGGCTGGCCA TCCACGCAAT GACGACTTCA ACGGCGCGCA ACTGGAGGGC GTGGGTCTCT ACCAGGTCAC GCACCGGGCG GGCGAACGCT TCAGCGTGGC CAAGGCCTAC CTCACGCCCC ACCTGGGCCG GACCAATCTG CAGGTGGTGA CCGGCGCGCA GGCCACGCGC ATCCTGTTCG AGGGCCGGCG CGCCACGGGC GTGGAATACC GCCGAGGCGG CCAGACGCAG CAGGTGCGCG CCACGCGTGA GGTGCTGCTG TCGGCGGGGG CGCTGCTATC GCCGCAATTG CTCATGCTCT CGGGGGTGGG GCCGGGCGCG CAGTTGCAGA GCCACGGCAT TGGCGTGGTG CACGATCTGC CGGGCGTGGG CGCGCATCTG CACGACCATC CCGACGTGGT GCAGGTGATG GATGCACCGC GGTTGACGGA CCTCTTCGGC CTGTCACTGC CCGGGGCGCT GAACGTGCTG CGCGGCGTGC GGGAGTGGCG TGCGCACCGC AGCGGCATGC TGACCACTAA CTTCGCCGAG GCTGGCGGCT TCATCAAGAG TCGCCCCGAG GAGCCATTGC CCGACCTGCA GCTGCACTTC GTGGTCGGCA AGCTGCTGGA CCACGGCCGG CGGGCCACAT GGGGCCATGG CTATTCCTGC CATGTATGCC TGCTGCAGCC CCGAAGCCGC GGCCGGGTGA CGCTGGCCAG CGCCGACCCG GCGGCCGCTC CGCTGGTGGA CCCGGCATTC TTCAGTGATC CCGACGACAT GCAGCGCATG GTGCGCGGCG TGCGGCGCAT GCGCGAGATC TTGGCACAGC CCGCCCTGGC CAGCCTGGGC GCGCGTGAGC TGCCCCATTC GTCCCGTGCG CAAAGCGATG CACAGATCGA GCAGTTCATC CGCGACTGGG CCGACACCAT CTACCACCCC GTGGGCACGT GCCGCATGGG CTGCGGTCCG CTGGACGTGG TGGATGCCCA ACTGCGTGTG CATGGCCTGC AGGCTCTGCG TGTGGTGGAC GCATCCATCA TGCCGCGCAT TGTGAGCGGC AACACGAATG CACCCACGGT GATGATTGCC GAGCGCGCGG TGGACTTGCT GCGCCAGGCT GCATGA
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Protein sequence | MREFDYVVIG GGSAGCVLAG RLSEDPTVRV CLLEAGGSDA SVLIHCPAGL AAMARSGAFN WGLHTTPQAG LGGRRGYQPR GKVLGDSSSV NAMIYARGHA SDYDHWAAAG NAGWGWNDVL PYFLRAEHNE RGASAWHGTD GPLNVADLQS PQRASRAFVE AGVQAGHPRN DDFNGAQLEG VGLYQVTHRA GERFSVAKAY LTPHLGRTNL QVVTGAQATR ILFEGRRATG VEYRRGGQTQ QVRATREVLL SAGALLSPQL LMLSGVGPGA QLQSHGIGVV HDLPGVGAHL HDHPDVVQVM DAPRLTDLFG LSLPGALNVL RGVREWRAHR SGMLTTNFAE AGGFIKSRPE EPLPDLQLHF VVGKLLDHGR RATWGHGYSC HVCLLQPRSR GRVTLASADP AAAPLVDPAF FSDPDDMQRM VRGVRRMREI LAQPALASLG ARELPHSSRA QSDAQIEQFI RDWADTIYHP VGTCRMGCGP LDVVDAQLRV HGLQALRVVD ASIMPRIVSG NTNAPTVMIA ERAVDLLRQA A
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