Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3705 |
Symbol | |
ID | 4673328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3923870 |
End bp | 3925279 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840737 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_987892 |
Protein GI | 121595996 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0825839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCT CTTCAGGCGC GTCGCCTGCC CCGTCCGCCA CCGCCTTCTC ATCGCTGCCT CTGTCCCCTG AAATGCTGGC CAACCTGCAG CAGCTGGGCT ATGCGCAGAT GACGCCCATC CAGGCCGCCA GCCTGCCCTT CAGCCTGCAG GGCCGTGATC TGATCGCCCA GGCCAGCACC GGCAGCGGCA AGACAGCGGC CTTTGGCTTG GCCATGGTCG ATCGGCTGAA CCCGCGCTGG TTCGCCGTCC AGGGCCTGGT GCTGTGCCCC ACGCGCGAGC TGGCCGATCA GGTGGCCACC GAGATCCGCC GCTTGGCGCG TGCGCAAGAC AACATCAAGG TCGTCACTGT GTATGGGGGC GTGCCTTCGC GCGGCCAGAT TGCTTCGCTG GAGAACGGTG CCCACATCGT GGTCGGCACG CCGGGCCGCG TGATGGACCT GATGGAGCGC GGCAAGCTCG ACATCGCCAA CCTCAAGACC TTGGTGCTTG ACGAGGCCGA CCGCATGCTG GACATGGGCT TCCTGGCCGA TATTGAGACC GTGGTGCGCC AGTGTCCGGC CGAGCGCCAG ACCCTGCTGT TCTCCGCCAC CTATCCCGAC GGCATTGCGG GACTGGCACA GCGTTTCATG CGCGCGCCCC AGATGGTGAA GGTGGCCGCC CAGCACGGTG CAGGCAAGAT CGCGCAGCGC TGGTATGAGG TGGATGCACG CGAGAAGGTC GACGTGGTGG CGCGCATGCT CGCGCACTTT CGCCCTGCGT CGAGCATTGC CTTCTGCAAT ACCAAGCAGC AGTGCCGTAA CGTGGTGACT GCGCTGCAGA GCCAGGGATT CAGTGCCCTC GCCCTGTTTG GCGAGTTGGA GCAGCGCGAG CGTGACGAGG TGCTGGTGCA GTTTGCCAAC AAGAGCTGCA GCGTGCTCGT GGCCACCGAC GTGGCGGCGC GCGGCATCGA TATTGCCGAC CTCTCGGCCG TGATCAACGT CGACGTGACG CCCGATCCCG AGGTGCACAT CCACCGCATC GGCCGCACGG GCCGTGGCGA TGCCGAGGGG CTGGCGCTGA ACCTGGTCAG CATGGATGAG ATGGGCAGCG TGGGCAGGAT CGAATTGCTG CAAGGCCGTG CCTGCGAGTT CTTTCCGGTG GATGAACTCA CCCCTACGGC AGGGGGCGAA CTGCGGCCAC CCATGTGCAC CATCCAAATC ATCGGCGGGC GCAGGGAGAA GATCCGCGCC GGCGACGTGA TGGGCGCCAT GTGCGCCGAC TTCGGCTATG CGCGCGAGCA GATCGGCAAG ATCAGTGTCA ACGATTTTTC CACCTACGTG GCCGTGGACC GCGCCATCGC GGCCCAGGCC TGCGCCAAGC TGAATGCGGG CCGCGTCAAA GGCAAGATGG TGAAGGCGCG CTTGCTGTAG
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Protein sequence | MTISSGASPA PSATAFSSLP LSPEMLANLQ QLGYAQMTPI QAASLPFSLQ GRDLIAQAST GSGKTAAFGL AMVDRLNPRW FAVQGLVLCP TRELADQVAT EIRRLARAQD NIKVVTVYGG VPSRGQIASL ENGAHIVVGT PGRVMDLMER GKLDIANLKT LVLDEADRML DMGFLADIET VVRQCPAERQ TLLFSATYPD GIAGLAQRFM RAPQMVKVAA QHGAGKIAQR WYEVDAREKV DVVARMLAHF RPASSIAFCN TKQQCRNVVT ALQSQGFSAL ALFGELEQRE RDEVLVQFAN KSCSVLVATD VAARGIDIAD LSAVINVDVT PDPEVHIHRI GRTGRGDAEG LALNLVSMDE MGSVGRIELL QGRACEFFPV DELTPTAGGE LRPPMCTIQI IGGRREKIRA GDVMGAMCAD FGYAREQIGK ISVNDFSTYV AVDRAIAAQA CAKLNAGRVK GKMVKARLL
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