Gene Ajs_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3705 
Symbol 
ID4673328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3923870 
End bp3925279 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content66% 
IMG OID639840737 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_987892 
Protein GI121595996 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0825839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT CTTCAGGCGC GTCGCCTGCC CCGTCCGCCA CCGCCTTCTC ATCGCTGCCT 
CTGTCCCCTG AAATGCTGGC CAACCTGCAG CAGCTGGGCT ATGCGCAGAT GACGCCCATC
CAGGCCGCCA GCCTGCCCTT CAGCCTGCAG GGCCGTGATC TGATCGCCCA GGCCAGCACC
GGCAGCGGCA AGACAGCGGC CTTTGGCTTG GCCATGGTCG ATCGGCTGAA CCCGCGCTGG
TTCGCCGTCC AGGGCCTGGT GCTGTGCCCC ACGCGCGAGC TGGCCGATCA GGTGGCCACC
GAGATCCGCC GCTTGGCGCG TGCGCAAGAC AACATCAAGG TCGTCACTGT GTATGGGGGC
GTGCCTTCGC GCGGCCAGAT TGCTTCGCTG GAGAACGGTG CCCACATCGT GGTCGGCACG
CCGGGCCGCG TGATGGACCT GATGGAGCGC GGCAAGCTCG ACATCGCCAA CCTCAAGACC
TTGGTGCTTG ACGAGGCCGA CCGCATGCTG GACATGGGCT TCCTGGCCGA TATTGAGACC
GTGGTGCGCC AGTGTCCGGC CGAGCGCCAG ACCCTGCTGT TCTCCGCCAC CTATCCCGAC
GGCATTGCGG GACTGGCACA GCGTTTCATG CGCGCGCCCC AGATGGTGAA GGTGGCCGCC
CAGCACGGTG CAGGCAAGAT CGCGCAGCGC TGGTATGAGG TGGATGCACG CGAGAAGGTC
GACGTGGTGG CGCGCATGCT CGCGCACTTT CGCCCTGCGT CGAGCATTGC CTTCTGCAAT
ACCAAGCAGC AGTGCCGTAA CGTGGTGACT GCGCTGCAGA GCCAGGGATT CAGTGCCCTC
GCCCTGTTTG GCGAGTTGGA GCAGCGCGAG CGTGACGAGG TGCTGGTGCA GTTTGCCAAC
AAGAGCTGCA GCGTGCTCGT GGCCACCGAC GTGGCGGCGC GCGGCATCGA TATTGCCGAC
CTCTCGGCCG TGATCAACGT CGACGTGACG CCCGATCCCG AGGTGCACAT CCACCGCATC
GGCCGCACGG GCCGTGGCGA TGCCGAGGGG CTGGCGCTGA ACCTGGTCAG CATGGATGAG
ATGGGCAGCG TGGGCAGGAT CGAATTGCTG CAAGGCCGTG CCTGCGAGTT CTTTCCGGTG
GATGAACTCA CCCCTACGGC AGGGGGCGAA CTGCGGCCAC CCATGTGCAC CATCCAAATC
ATCGGCGGGC GCAGGGAGAA GATCCGCGCC GGCGACGTGA TGGGCGCCAT GTGCGCCGAC
TTCGGCTATG CGCGCGAGCA GATCGGCAAG ATCAGTGTCA ACGATTTTTC CACCTACGTG
GCCGTGGACC GCGCCATCGC GGCCCAGGCC TGCGCCAAGC TGAATGCGGG CCGCGTCAAA
GGCAAGATGG TGAAGGCGCG CTTGCTGTAG
 
Protein sequence
MTISSGASPA PSATAFSSLP LSPEMLANLQ QLGYAQMTPI QAASLPFSLQ GRDLIAQAST 
GSGKTAAFGL AMVDRLNPRW FAVQGLVLCP TRELADQVAT EIRRLARAQD NIKVVTVYGG
VPSRGQIASL ENGAHIVVGT PGRVMDLMER GKLDIANLKT LVLDEADRML DMGFLADIET
VVRQCPAERQ TLLFSATYPD GIAGLAQRFM RAPQMVKVAA QHGAGKIAQR WYEVDAREKV
DVVARMLAHF RPASSIAFCN TKQQCRNVVT ALQSQGFSAL ALFGELEQRE RDEVLVQFAN
KSCSVLVATD VAARGIDIAD LSAVINVDVT PDPEVHIHRI GRTGRGDAEG LALNLVSMDE
MGSVGRIELL QGRACEFFPV DELTPTAGGE LRPPMCTIQI IGGRREKIRA GDVMGAMCAD
FGYAREQIGK ISVNDFSTYV AVDRAIAAQA CAKLNAGRVK GKMVKARLL